RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 ARSAP15289 507 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 ZNF30P17039 623 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 PREPP48147 710 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 ZNF45Q02386 682 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 LDLRAD1Q5T700 205 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 SHQ1Q6PI26 577 aaKnown RBP12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 TMIGD1Q6UXZ0 262 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 ZNF517Q6ZMY9 492 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 GALNT10Q86SR1 603 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 FAM98AQ8NCA5 519 aaKnown RBP12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 ZNF675Q8TD23 568 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 ISL2Q96A47 359 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 TRIB3Q96RU7 358 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 DPH2Q9BQC3 489 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 TMEM175Q9BSA9 504 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 IL1RAPQ9NPH3 570 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 TMEM138Q9NPI0 162 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 DLGAP4Q9Y2H0 992 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 ZNF840PA6NDX5 716 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 UPK3BL1B0FP48 263 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 UPK3BL2E5RIL1 263 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 MITFO75030 526 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 BCAS1O75363 584 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 HLA-DQA2P01906 255 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 ACRV1P26436 265 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 PSMD4P55036 377 aaKnown RBP12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 NCS1P62166 190 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 GRM2Q14416 872 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 SUZ12Q15022 739 aaKnown RBP12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 PCBP2Q15366 365 aaKnown RBP eCLIP12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 ZNF311Q5JNZ3 666 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 C10orf62Q5T681 223 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 VTCN1Q7Z7D3 282 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 HS3ST5Q8IZT8 346 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 C1QTNF1Q9BXJ1 281 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 R3HDMLQ9H3Y0 253 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 MARCH7Q9H992 704 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 DNAJC27Q9NZQ0 273 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 ACTL7AQ9Y615 435 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 TLX2O43763 284 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 IFNA16P05015 189 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 INHAP05111 366 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 GALTP07902 379 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 HTR1BP28222 390 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 PSMD8P48556 350 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 KCNC4Q03721 635 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 PCDH1Q08174 1060 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 PLEKHS1Q5SXH7 462 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 ZNF783Q6ZMS7 281 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 C7orf61Q8IZ16 206 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 ZNF366Q8N895 744 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 KCNN1Q92952 543 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 CAMK1GQ96NX5 476 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 DOHHQ9BU89 302 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 BRINP2Q9C0B6 783 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 RHCGQ9UBD6 479 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 FUOMA2VDF0 154 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 WASH4PA8MWX3 477 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 VIPP01282 170 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 HIST1H2ABP04908 130 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 RETP07949 1114 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 PSKH1P11801 424 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 GTF2E2P29084 291 aaKnown RBP12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 VIPR1P32241 457 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 GATMP50440 423 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 FCHO2Q0JRZ9 810 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 RAPSNQ13702 412 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 CLEC12AQ5QGZ9 265 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 SMARCD3Q6STE5 483 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 HIST3H2AQ7L7L0 130 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 TSPYL5Q86VY4 417 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 RNF130Q86XS8 419 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 DNASE1L2Q92874 299 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 HIST1H2ACQ93077 130 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 BOCQ9BWV1 1114 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 TMEM27Q9HBJ8 222 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 TMEM45AQ9NWC5 275 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 MS4A12Q9NXJ0 267 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 GMPR2Q9P2T1 348 aaKnown RBP12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 P2RX2Q9UBL9 471 aa12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 MAGED1Q9Y5V3 778 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-204ENST00000380756 ABHD14A-ACY1A0A1B0GW23 586 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 CCRL2O00421 344 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 VILLO15195 856 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 PCCBP05166 539 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 WASP42768 502 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 VEGFBP49765 207 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 KHKP50053 298 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 PHC1P78364 1004 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 FAM189BP81408 668 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 C6orf183Q5T699 404 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 LIPJQ5W064 366 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 RBM12BQ8IXT5 1001 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 NATD1Q8N6N6 113 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 ZNF433Q8N7K0 673 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 TCEANCQ8N8B7 351 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 FAM46DQ8NEK8 389 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 OR8H1Q8NGG4 311 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 YIPF4Q9BSR8 244 aa12.3□□□□□ -0.44
DNMT3A-204ENST00000380756 HERC2P3Q9BVR0 1158 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms