RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 GARNL3Q5VVW2 1013 aa18.27■□□□□ 0.52
HLA-DRB1-201ENST00000360004 ZYG11AQ6WRX3 759 aa18.27■□□□□ 0.52
HLA-DRB1-201ENST00000360004 GOLGA6L1Q8N7Z2 621 aa18.27■□□□□ 0.52
HLA-DRB1-201ENST00000360004 BANPQ8N9N5 519 aa18.27■□□□□ 0.52
HLA-DRB1-201ENST00000360004 ARMC2Q8NEN0 867 aa18.27■□□□□ 0.52
HLA-DRB1-201ENST00000360004 MACROD1Q9BQ69 325 aa18.27■□□□□ 0.52
HLA-DRB1-201ENST00000360004 ERVK-6Q9BXR3 956 aa18.27■□□□□ 0.52
HLA-DRB1-201ENST00000360004 MKS1Q9NXB0 559 aa18.27■□□□□ 0.52
HLA-DRB1-201ENST00000360004 PCTPQ9UKL6 214 aa18.27■□□□□ 0.52
HLA-DRB1-201ENST00000360004 SDK2Q58EX2 2172 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 SRRM3A6NNA2 597 aaPredicted RBP18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 H3BMH7 237 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 E2F3O00716 465 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 SBK3P0C264 359 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 LIFP15018 202 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 ITPKBP27987 946 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 HPDP32754 393 aaPredicted RBP18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 RORAP35398 523 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 HNF4AP41235 474 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 EMP3P54852 163 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 TMPRSS3P57727 454 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 SKP1P63208 163 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 NFKB2Q00653 900 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 ASPHQ12797 758 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 DNASE1L3Q13609 305 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 PWP1Q13610 501 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 TBCCQ15814 346 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 NKAIN1Q4KMZ8 207 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 TTC19Q6DKK2 380 aaPredicted RBP18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 MED27Q6P2C8 311 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 PRMT9Q6P2P2 845 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 SH2D5Q6ZV89 423 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 HDXQ7Z353 690 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 VN1R4Q7Z5H5 301 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 REPS1Q96D71 796 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 FAM111AQ96PZ2 611 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 C12orf65Q9H3J6 166 aaKnown RBP18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 NT5DC2Q9H857 520 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 ANKHQ9HCJ1 492 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 KCNK9Q9NPC2 374 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 EMCNQ9ULC0 261 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 PADI2Q9Y2J8 665 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 MAU2Q9Y6X3 613 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 ACACBO00763 2458 aa18.26■□□□□ 0.51
HLA-DRB1-201ENST00000360004 APC2O95996 2303 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 A0A087WV48 116 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 C21orf140B9A014 251 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 CLDN9O95484 217 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 OTCP00480 354 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 RPS17P08708 135 aaKnown RBP18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 FBLP22087 321 aaKnown RBP18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 GSTM2P28161 218 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 PRKAA2P54646 552 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 STXBP1P61764 594 aaKnown RBP18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 TLE3Q04726 772 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 DDX39BQ13838 428 aaKnown RBP18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 TOR1AIP1Q5JTV8 583 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 LIPJQ5W064 366 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 GRHL2Q6ISB3 625 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 ABHD13Q7L211 337 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 TMEM151AQ8N4L1 468 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 TRPC4APQ8TEL6 797 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 MMABQ96EY8 250 aaPredicted RBP18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 PGM2Q96G03 612 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 NSUN5Q96P11 429 aaKnown RBP18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 GBP5Q96PP8 586 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 SARGQ9BW04 601 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 ZNF304Q9HCX3 659 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 STK38LQ9Y2H1 464 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 PLLPQ9Y342 182 aa18.25■□□□□ 0.51
HLA-DRB1-201ENST00000360004 ACACAQ13085 2346 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 FRYQ5TBA9 3013 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 A0A0A6YYC8 382 aaPredicted RBP18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 I3L1I5 382 aaPredicted RBP18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 UGDHO60701 494 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 CD63P08962 238 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 TSPAN8P19075 237 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 EPORP19235 508 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 IMPDH1P20839 514 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 OR1D4P47884 311 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 CDH13P55290 713 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 CPSF6Q16630 551 aaKnown RBP eCLIP18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 ZNF678Q5SXM1 525 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 MILR1Q7Z6M3 343 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 ENDOVQ8N8Q3 282 aaKnown RBP18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 ANKRD53Q8N9V6 530 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 KCT2Q8NC54 265 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 TCP10LQ8TDR4 215 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 ZNF483Q8TF39 744 aaPredicted RBP18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 WDR34Q96EX3 536 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 MVB12AQ96EY5 273 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 FAR2Q96K12 515 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 MAGEB10Q96LZ2 347 aaPredicted RBP18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 C10orf90Q96M02 699 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 TMEM237Q96Q45 408 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 GPR87Q9BY21 358 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 SYNPO2LQ9H987 977 aa18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 AKIRIN1Q9H9L7 192 aaPredicted RBP18.24■□□□□ 0.51
HLA-DRB1-201ENST00000360004 FARSAQ9Y285 508 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms