RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 CDK6Q00534 326 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 GRIK2Q13002 908 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 TGFBIQ15582 683 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 LINGO2Q7L985 606 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 NUS1Q96E22 293 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 LRCH3Q96II8 777 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 CST11Q9H112 138 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 MIR1-1HGQ9H1L0 117 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 MMP27Q9H306 513 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 FANCFQ9NPI8 374 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 ZCCHC3Q9NUD5 404 aaKnown RBP11.86□□□□□ -0.51
DNMT1-202ENST00000359526 CLDND1Q9NY35 253 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 RIMKLBQ9ULI2 386 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 MEMO1Q9Y316 297 aa11.86□□□□□ -0.51
DNMT1-202ENST00000359526 MBLAC1A4D2B0 266 aaPredicted RBP11.85□□□□□ -0.51
DNMT1-202ENST00000359526 ANKRD66B4E2M5 251 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 DGKQP52824 942 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 ARSFP54793 590 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 ZNF45Q02386 682 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 GANABQ14697 944 aaKnown RBP11.85□□□□□ -0.51
DNMT1-202ENST00000359526 PLCZ1Q86YW0 608 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 IGDCC3Q8IVU1 814 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 KCNJ9Q92806 393 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 FATE1Q969F0 183 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 PEBP4Q96S96 227 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 SLC39A3Q9BRY0 314 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 MTMR11A4FU01 709 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 CNMDO75829 334 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 RCBTB2O95199 551 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 ATP1B2P14415 290 aaPredicted RBP11.85□□□□□ -0.51
DNMT1-202ENST00000359526 ZNF3P17036 446 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 DEFA5Q01523 94 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 ATG9BQ674R7 924 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 CHST4Q8NCG5 386 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 ZSWIM3Q96MP5 696 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 ZNF382Q96SR6 550 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 OR51V1Q9H2C8 321 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 IFT46Q9NQC8 304 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 CCM2LQ9NUG4 571 aaPredicted RBP11.85□□□□□ -0.51
DNMT1-202ENST00000359526 MARK1Q9P0L2 795 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 PPIEQ9UNP9 301 aaKnown RBP11.85□□□□□ -0.51
DNMT1-202ENST00000359526 RNF6Q9Y252 685 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 PCDHGB6Q9Y5F9 930 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 A0A0J9YVX5 310 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 A6NHS1 94 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 CDC7O00311 574 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 GALTP07902 379 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 CHRM5P08912 532 aaPredicted RBP11.85□□□□□ -0.51
DNMT1-202ENST00000359526 G6PDP11413 515 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 CSTF1Q05048 431 aaKnown RBP11.85□□□□□ -0.51
DNMT1-202ENST00000359526 ADAM15Q13444 863 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 PRAMEF14Q5SWL7 426 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 PRAMEF13Q5VWM6 474 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 VITQ6UXI7 678 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 RHEBL1Q8TAI7 183 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 METTL21AQ8WXB1 218 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 ITPKCQ96DU7 683 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 HSH2DQ96JZ2 352 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 ZC3H10Q96K80 434 aaKnown RBP11.85□□□□□ -0.51
DNMT1-202ENST00000359526 ZNF717Q9BY31 904 aaPredicted RBP11.85□□□□□ -0.51
DNMT1-202ENST00000359526 AMBNQ9NP70 447 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 VEGFDO43915 354 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 RASAL1O95294 804 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 HTR1EP28566 365 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 RBM34P42696 430 aaKnown RBP11.85□□□□□ -0.51
DNMT1-202ENST00000359526 ADAM8P78325 824 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 UPP1Q16831 310 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 FAAH2Q6GMR7 532 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 HMBOX1Q6NT76 420 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 SPAG16Q8N0X2 631 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 HDDC3Q8N4P3 179 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 C1orf52Q8N6N3 182 aaKnown RBP11.85□□□□□ -0.51
DNMT1-202ENST00000359526 OR14C36Q8NHC7 312 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 NEK7Q8TDX7 302 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 DNAJA4Q8WW22 397 aaPredicted RBP11.85□□□□□ -0.51
DNMT1-202ENST00000359526 TMEM80Q96HE8 168 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 SCLYQ96I15 445 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 MYOCQ99972 504 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 DPAGT1Q9H3H5 408 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 ZNF696Q9H7X3 374 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 MEAF6Q9HAF1 191 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 TNFRSF10DQ9UBN6 386 aa11.85□□□□□ -0.51
DNMT1-202ENST00000359526 OR5K4A6NMS3 321 aa11.84□□□□□ -0.51
DNMT1-202ENST00000359526 DENRO43583 198 aaKnown RBP11.84□□□□□ -0.51
DNMT1-202ENST00000359526 CHP2O43745 196 aa11.84□□□□□ -0.51
DNMT1-202ENST00000359526 PRAMEF11O60813 436 aa11.84□□□□□ -0.51
DNMT1-202ENST00000359526 GPR32O75388 356 aa11.84□□□□□ -0.51
DNMT1-202ENST00000359526 ARL6IP5O75915 188 aa11.84□□□□□ -0.51
DNMT1-202ENST00000359526 SOX30O94993 753 aa11.84□□□□□ -0.51
DNMT1-202ENST00000359526 ATP5A1P25705 553 aaKnown RBP11.84□□□□□ -0.51
DNMT1-202ENST00000359526 BMPR1AP36894 532 aa11.84□□□□□ -0.51
DNMT1-202ENST00000359526 LEPRP48357 1165 aaKnown RBP11.84□□□□□ -0.51
DNMT1-202ENST00000359526 PRSS55Q6UWB4 352 aaPredicted RBP11.84□□□□□ -0.51
DNMT1-202ENST00000359526 THOC6Q86W42 341 aaKnown RBP11.84□□□□□ -0.51
DNMT1-202ENST00000359526 ISOC1Q96CN7 298 aa11.84□□□□□ -0.51
DNMT1-202ENST00000359526 LMLNQ96KR4 655 aa11.84□□□□□ -0.51
DNMT1-202ENST00000359526 RANBP9Q96S59 729 aa11.84□□□□□ -0.51
DNMT1-202ENST00000359526 SLC30A2Q9BRI3 323 aa11.84□□□□□ -0.51
DNMT1-202ENST00000359526 CHIAQ9BZP6 476 aa11.84□□□□□ -0.51
DNMT1-202ENST00000359526 CD244Q9BZW8 370 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms