RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 NR5A2O00482 541 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 AREL1O15033 823 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 LSM1O15116 133 aaKnown RBP7.92□□□□□ -1.14
CD44-205ENST00000352818 ANGPT2O15123 496 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 SPINT1O43278 529 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 MAP3K7O43318 606 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 PEX1O43933 1283 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 UGDHO60701 494 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 EEDO75530 441 aaKnown RBP7.92□□□□□ -1.14
CD44-205ENST00000352818 C8BP07358 591 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 CAPN1P07384 714 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 HSD17B1P14061 328 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 ACPPP15309 386 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 EPB42P16452 691 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 XRCC1P18887 633 aaPredicted RBP7.92□□□□□ -1.14
CD44-205ENST00000352818 CAPN3P20807 821 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 PRPH2P23942 346 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 HMOX2P30519 316 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 AKT1P31749 480 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 ETV3P41162 512 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 ZFP36L2P47974 494 aaKnown RBP7.92□□□□□ -1.14
CD44-205ENST00000352818 SLC6A12P48065 614 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 HSPA7P48741 367 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 RPIAP49247 311 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 DPTQ07507 201 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 PCDH1Q08174 1060 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 MAD2L1Q13257 205 aaPredicted RBP7.92□□□□□ -1.14
CD44-205ENST00000352818 BOP1Q14137 746 aaKnown RBP7.92□□□□□ -1.14
CD44-205ENST00000352818 FLOT2Q14254 428 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 TAF11Q15544 211 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 MUM1Q2TAK8 710 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 POM121L1PQ3SYA9 428 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 FNDC3BQ53EP0 1204 aaKnown RBP7.92□□□□□ -1.14
CD44-205ENST00000352818 PRR30Q53SZ7 412 aaPredicted RBP7.92□□□□□ -1.14
CD44-205ENST00000352818 ZNF542PQ5EBM4 170 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 LRRC73Q5JTD7 316 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 TCHHL1Q5QJ38 904 aaPredicted RBP7.92□□□□□ -1.14
CD44-205ENST00000352818 C6orf136Q5SQH8 315 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 C9orf64Q5T6V5 341 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 Q6ZSR9 355 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 Q6ZVL8 140 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 UBE2R2Q712K3 238 aaPredicted RBP7.92□□□□□ -1.14
CD44-205ENST00000352818 TRIM46Q7Z4K8 759 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 ARPINQ7Z6K5 226 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 MILR1Q7Z6M3 343 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 DSG4Q86SJ6 1040 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 SLC22A18ASQ8N1D0 253 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 CDYL2Q8N8U2 506 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 L3MBTL4Q8NA19 623 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 TEX19Q8NA77 164 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 GOLM1Q8NBJ4 401 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 TMEM145Q8NBT3 493 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 FBXO15Q8NCQ5 510 aaPredicted RBP7.92□□□□□ -1.14
CD44-205ENST00000352818 OR9I1Q8NGQ6 314 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 OR2T11Q8NH01 316 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 METTL6Q8TCB7 284 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 DNAJC9Q8WXX5 260 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 USP7Q93009 1102 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 NKD1Q969G9 470 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 GLYATL1Q969I3 302 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 RAB7BQ96AH8 199 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 RIOK2Q9BVS4 552 aaKnown RBP7.92□□□□□ -1.14
CD44-205ENST00000352818 HDAC8Q9BY41 377 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 ZCCHC2Q9C0B9 1178 aaKnown RBP7.92□□□□□ -1.14
CD44-205ENST00000352818 ABCG8Q9H221 673 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 MUC13Q9H3R2 512 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 IPPKQ9H8X2 491 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 FBRSQ9HAH7 460 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 PRDM8Q9NQV8 689 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 C6orf203Q9P0P8 240 aaPredicted RBP7.92□□□□□ -1.14
CD44-205ENST00000352818 CD84Q9UIB8 345 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 PSMD13Q9UNM6 376 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 CCL27Q9Y4X3 112 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 ANGPTL3Q9Y5C1 460 aa7.92□□□□□ -1.14
CD44-205ENST00000352818 KCNE1BA0A087WTH5 132 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 PRSS51A0A1B0GVH4 220 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 A0A1W2PP18 115 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 SLC5A10A0PJK1 596 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 TTLL8A6PVC2 850 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 C1QTNF3-AMACRE9PGA6 284 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 FXYD1O00168 92 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 AGRPO00253 132 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 KPNA3O00505 521 aaPredicted RBP7.91□□□□□ -1.14
CD44-205ENST00000352818 LIN7AO14910 233 aaPredicted RBP7.91□□□□□ -1.14
CD44-205ENST00000352818 RGS14O43566 566 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 PSIP1O75475 530 aaKnown RBP7.91□□□□□ -1.14
CD44-205ENST00000352818 SLC22A3O75751 556 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 RNASEH2AO75792 299 aaKnown RBP7.91□□□□□ -1.14
CD44-205ENST00000352818 SORBS2O94875 1100 aaKnown RBP7.91□□□□□ -1.14
CD44-205ENST00000352818 GUCA1CO95843 209 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 HIST1H2AGP0C0S8 130 aaPredicted RBP7.91□□□□□ -1.14
CD44-205ENST00000352818 EPORP19235 508 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 HIST1H2ADP20671 130 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 JAK1P23458 1154 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 MAT2AP31153 395 aaKnown RBP7.91□□□□□ -1.14
CD44-205ENST00000352818 HTR6P50406 440 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 METAP1P53582 386 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 DIO3P55073 304 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 KCNK10P57789 538 aa7.91□□□□□ -1.14
CD44-205ENST00000352818 SESN3P58005 492 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms