RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 HOXC13P31276 330 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 ADRA1AP35348 466 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 MAGEA2P43356 314 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 ETV1P50549 477 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 NRG1Q02297 640 aaPredicted RBP14.84□□□□□ -0.03
LIMK2-203ENST00000340552 UBE3AQ05086 875 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 EFEMP1Q12805 493 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 DOC2BQ14184 412 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 ZMYND11Q15326 602 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 GTDC1Q4AE62 458 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 CLVS2Q5SYC1 327 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 GARNL3Q5VVW2 1013 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 OR2T5Q6IEZ7 315 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 OR2T29Q8NH02 315 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 FBXW5Q969U6 566 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 MAGEB10Q96LZ2 347 aaPredicted RBP14.84□□□□□ -0.03
LIMK2-203ENST00000340552 CATSPERBQ9H7T0 1116 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 MCUBQ9NWR8 336 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 ING3Q9NXR8 418 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 HS3ST4Q9Y661 456 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 CLCA1A8K7I4 914 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 SUPT3HB4E1H0 165 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 FGF10O15520 208 aaPredicted RBP14.84□□□□□ -0.03
LIMK2-203ENST00000340552 ATG13O75143 517 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 GPX5O75715 221 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 HAPLN1P10915 354 aaPredicted RBP14.84□□□□□ -0.03
LIMK2-203ENST00000340552 HTR7P34969 479 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 KCNQ1P51787 676 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 CSNK2BP67870 215 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 PSPHP78330 225 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 TIAL1Q01085 375 aaKnown RBP eCLIP14.84□□□□□ -0.03
LIMK2-203ENST00000340552 TAF10Q12962 218 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 RIN1Q13671 783 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 VEPH1Q14D04 833 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 POU4F3Q15319 338 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 AANATQ16613 207 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 TSTQ16762 297 aaKnown RBP14.84□□□□□ -0.03
LIMK2-203ENST00000340552 TYW3Q6IPR3 259 aaKnown RBP14.84□□□□□ -0.03
LIMK2-203ENST00000340552 GCNT7Q6ZNI0 430 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 COMMD7Q86VX2 200 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 ATCAYQ86WG3 371 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 ATG16L2Q8NAA4 619 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 ZNF680Q8NEM1 530 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 ENKURQ8TC29 256 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 PCNPQ8WW12 178 aaKnown RBP14.84□□□□□ -0.03
LIMK2-203ENST00000340552 HBEGFQ99075 208 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 RAD9AQ99638 391 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 UQCC2Q9BRT2 126 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 KIF17Q9P2E2 1029 aa14.84□□□□□ -0.03
LIMK2-203ENST00000340552 MARCH4Q9P2E8 410 aaPredicted RBP14.84□□□□□ -0.03
LIMK2-203ENST00000340552 ZNF490Q9ULM2 529 aaPredicted RBP14.84□□□□□ -0.03
LIMK2-203ENST00000340552 MRPL42Q9Y6G3 142 aaKnown RBP14.84□□□□□ -0.03
LIMK2-203ENST00000340552 E9PAM4 449 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 SCAMP3O14828 347 aaKnown RBP14.83□□□□□ -0.04
LIMK2-203ENST00000340552 TBX18O95935 607 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 S1PR4O95977 384 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 UROSP10746 265 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 HMGCLP35914 325 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 ARHGDIAP52565 204 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 TBX4P57082 545 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.83□□□□□ -0.04
LIMK2-203ENST00000340552 GLYR1Q49A26 553 aaPredicted RBP14.83□□□□□ -0.04
LIMK2-203ENST00000340552 TEX261Q6UWH6 196 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 KIF18BQ86Y91 864 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 LINC00518Q8N0U6 118 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 FBXO22Q8NEZ5 403 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 COL21A1Q96P44 957 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 OR5M11Q96RB7 305 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 NUSAP1Q9BXS6 441 aaKnown RBP14.83□□□□□ -0.04
LIMK2-203ENST00000340552 PPIL3Q9H2H8 161 aaKnown RBP14.83□□□□□ -0.04
LIMK2-203ENST00000340552 SPNS1Q9H2V7 528 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 ZC4H2Q9NQZ6 224 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 TLR8Q9NR97 1041 aaKnown RBP14.83□□□□□ -0.04
LIMK2-203ENST00000340552 U3KQ87 197 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 OR51F1A6NGY5 319 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 TRIM3O75382 744 aaPredicted RBP14.83□□□□□ -0.04
LIMK2-203ENST00000340552 WDR47O94967 919 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 PGRP06401 933 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 CLEC2LP0C7M8 214 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 EVI2BP34910 448 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 CBX5P45973 191 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 AGTR2P50052 363 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 MADCAM1Q13477 382 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 KIAA0040Q15053 153 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 ARTNQ5T4W7 220 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 ANKS6Q68DC2 871 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 GPR153Q6NV75 609 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 FAM131AQ6UXB0 335 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 CCDC117Q8IWD4 279 aaPredicted RBP14.83□□□□□ -0.04
LIMK2-203ENST00000340552 ARHGAP12Q8IWW6 846 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 PHC2Q8IXK0 858 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 CPA6Q8N4T0 437 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 FERD3LQ96RJ6 166 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 CNPPD1Q9BV87 410 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 ASPNQ9BXN1 380 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 CRISPLD2Q9H0B8 497 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 HEBP1Q9NRV9 189 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 OLA1Q9NTK5 396 aaKnown RBP14.83□□□□□ -0.04
LIMK2-203ENST00000340552 PLCXD1Q9NUJ7 323 aa14.83□□□□□ -0.04
LIMK2-203ENST00000340552 SPASTQ9UBP0 616 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms