RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CALCOCO2Q13137 446 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 PCOLCEQ15113 449 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 ZKSCAN8Q15776 578 aaPredicted RBP18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 NDUFA9Q16795 377 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 C18orf21Q32NC0 220 aaPredicted RBP18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 KLHDC8AQ8IYD2 350 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 CAMKVQ8NCB2 501 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 SLC13A3Q8WWT9 602 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 SLC5A11Q8WWX8 675 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 ATL1Q8WXF7 558 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 C19orf60Q96EN9 201 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 GPR22Q99680 433 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 RBBP8Q99708 897 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 AICDAQ9GZX7 198 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 LHPPQ9H008 270 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 ZNF160Q9HCG1 818 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 NTNG1Q9Y2I2 539 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 OARD1Q9Y530 152 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 SLC22A7Q9Y694 548 aa18.76■□□□□ 0.59
PDZRN3-202ENST00000308537 DOPEY1Q5JWR5 2465 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 TRBC2A0A5B9 178 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 SGK494L7N484 410 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 MAP2K7O14733 419 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 DNAJB6O75190 326 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 CELA2AP08217 269 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 GNLYP22749 145 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 SOX11P35716 441 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 GMPRP36959 345 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 SCTRP47872 440 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 CCR8P51685 355 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 PLTPP55058 493 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 REEP5Q00765 189 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 POU4F1Q01851 419 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 HYAL2Q12891 473 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 NDUFAF7Q7L592 441 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 ANKRD53Q8N9V6 530 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 ZCCHC10Q8TBK6 192 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 SNRNP40Q96DI7 357 aaKnown RBP18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 THOC3Q96J01 351 aaKnown RBP18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 IMMP1LQ96LU5 166 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 TRIM54Q9BYV2 358 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 FAM129AQ9BZQ8 928 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 UNKQ9C0B0 810 aaKnown RBP18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 VN1R1Q9GZP7 353 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 DERL2Q9GZP9 239 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 LRRC4CQ9HCJ2 640 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 GPAMQ9HCL2 828 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 SLC22A14Q9Y267 594 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 PCDHGA10Q9Y5H3 936 aa18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 UTP20O75691 2785 aaKnown RBP18.75■□□□□ 0.59
PDZRN3-202ENST00000308537 OR2W5A6NFC9 320 aa18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 TCP11X1B4DZS4 312 aa18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 C4orf51C9J302 202 aa18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 PHGDHO43175 533 aaKnown RBP18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 KLHL41O60662 606 aa18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 ANXA5P08758 320 aa18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 AVPR1BP47901 424 aa18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 EEF1A2Q05639 463 aaKnown RBP18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 UBAP2LQ14157 1087 aaKnown RBP18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 C3orf62Q6ZUJ4 267 aa18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 THOC6Q86W42 341 aaKnown RBP18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 SPATA6LQ8N4H0 392 aa18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 OR51Q1Q8NH59 317 aa18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 PPP4R1Q8TF05 950 aa18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 RHBDF1Q96CC6 855 aa18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 UBXN10Q96LJ8 280 aa18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 TSNARE1Q96NA8 513 aa18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 CPNE1Q99829 537 aa18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 WDR77Q9BQA1 342 aaPredicted RBP18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 ZNF700Q9H0M5 742 aa18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 SLAMF7Q9NQ25 335 aa18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 ZDHHC18Q9NUE0 388 aa18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 HCN3Q9P1Z3 774 aa18.74■□□□□ 0.59
PDZRN3-202ENST00000308537 TAPBPO15533 448 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 PRAMEF4O60810 478 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 RDH16O75452 317 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 B3GALT4O96024 378 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 GSTA2P09210 222 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 PRR35P0CG20 571 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 GP5P40197 560 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 GDF5P43026 501 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 PWP1Q13610 501 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 AGAP7PQ5VUJ5 663 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 PRAMEF9Q5VWM5 478 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 FAAH2Q6GMR7 532 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 LANCL3Q6ZV70 420 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 ADAMTSL2Q86TH1 951 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 ATCAYQ86WG3 371 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 OR5T3Q8NGG3 340 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 NT5CQ8TCD5 201 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 AGAP4Q96P64 663 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 TMEM79Q9BSE2 394 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 YIPF2Q9BWQ6 316 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 PELI2Q9HAT8 420 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 LANCL2Q9NS86 450 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 ASF1BQ9NVP2 202 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 MKL2Q9ULH7 1088 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 UTP11Q9Y3A2 253 aaKnown RBP18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 NAALAD2Q9Y3Q0 740 aa18.73■□□□□ 0.59
PDZRN3-202ENST00000308537 ZGRF1Q86YA3 2104 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms