RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 UPF1Q92900 1129 aaKnown RBP eCLIP12.01□□□□□ -0.49
ABCA3-201ENST00000301732 DPH2Q9BQC3 489 aaPredicted RBP12.01□□□□□ -0.49
ABCA3-201ENST00000301732 DNAJA1P31689 397 aaKnown RBP12.01□□□□□ -0.49
ABCA3-201ENST00000301732 HERVK_113P63132 956 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 CHRNA6Q15825 494 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 ELP2Q6IA86 826 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 TATDN1Q6P1N9 297 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 TSSK6Q9BXA6 273 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 ERVK-6Q9BXR3 956 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 MTFR1LQ9H019 292 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 TET3O43151 1660 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 MYH10P35580 1976 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 FAM234BA2RU67 622 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 SLC22A1O15245 554 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 DLX3O60479 287 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 LCKP06239 509 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 EVI2BP34910 448 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 PREPP48147 710 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 TAS2R50P59544 299 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 RPS13P62277 151 aaKnown RBP12□□□□□ -0.49
ABCA3-201ENST00000301732 OR4E2Q8NGC2 313 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 OR10A4Q9H209 315 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 COLEC10Q9Y6Z7 277 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 DISC1C4P0D8 188 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 EEF1E1-BLOC1S5C9J1V9 151 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 AHSGP02765 367 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 CELP19835 753 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 DRD5P21918 477 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 KHKP50053 298 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 GTF2IRD2BQ6EKJ0 949 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 KANSL1Q7Z3B3 1105 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 GTF2IRD2Q86UP8 949 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 SMARCD2Q92925 531 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 TSNAXQ99598 290 aaKnown RBP12□□□□□ -0.49
ABCA3-201ENST00000301732 MND1Q9BWT6 205 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 TUBG2Q9NRH3 451 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 WRAP73Q9P2S5 460 aaPredicted RBP12□□□□□ -0.49
ABCA3-201ENST00000301732 HAS3O00219 553 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 ADAP00813 363 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 MMP3P08254 477 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 LIPCP11150 499 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 GTF2F2P13984 249 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 GNRHRP30968 328 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 RAB4BP61018 213 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 LASP1Q14847 261 aaKnown RBP12□□□□□ -0.49
ABCA3-201ENST00000301732 GPR157Q5UAW9 335 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 MEMO1Q9Y316 297 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 CYP3A7-CYP3A51PA0A087WV96 503 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 ZNF726A6NNF4 738 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 MPZL2O60487 215 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 CYP3A7P24462 503 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 MAPK8P45983 427 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 LSSP48449 732 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 MECP2P51608 486 aaKnown RBP12□□□□□ -0.49
ABCA3-201ENST00000301732 S100A12P80511 92 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 E2F1Q01094 437 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 ZNF616Q08AN1 781 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 OR2T5Q6IEZ7 315 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 OR2T29Q8NH02 315 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 PHOSPHO1Q8TCT1 267 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 ACOT12Q8WYK0 555 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 SCLYQ96I15 445 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 ALPK1Q96QP1 1244 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 CGREF1Q99674 301 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 SLC25A51Q9H1U9 297 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 ATG5Q9H1Y0 275 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 LHX5Q9H2C1 402 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 MKKSQ9NPJ1 570 aaPredicted RBP12□□□□□ -0.49
ABCA3-201ENST00000301732 C2CD4BA6NLJ0 364 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 PTPN6P29350 595 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 PDX1P52945 283 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 CRISP3P54108 245 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 FAM189BP81408 668 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 NIPAL4Q0D2K0 466 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 NLGN4YQ8NFZ3 816 aaPredicted RBP12□□□□□ -0.49
ABCA3-201ENST00000301732 GPR20Q99678 358 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 TBL1XR1Q9BZK7 514 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 FARSBQ9NSD9 589 aaKnown RBP12□□□□□ -0.49
ABCA3-201ENST00000301732 KCNK6Q9Y257 313 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 PSAT1Q9Y617 370 aa12□□□□□ -0.49
ABCA3-201ENST00000301732 M0R129 80 aa11.99□□□□□ -0.49
ABCA3-201ENST00000301732 FMO6PO60774 539 aa11.99□□□□□ -0.49
ABCA3-201ENST00000301732 AKR1C4P17516 323 aa11.99□□□□□ -0.49
ABCA3-201ENST00000301732 LEPRP48357 1165 aaKnown RBP11.99□□□□□ -0.49
ABCA3-201ENST00000301732 SQSTM1Q13501 440 aa11.99□□□□□ -0.49
ABCA3-201ENST00000301732 ENPP2Q13822 863 aa11.99□□□□□ -0.49
ABCA3-201ENST00000301732 VMACQ2NL98 169 aa11.99□□□□□ -0.49
ABCA3-201ENST00000301732 NOXRED1Q6NXP6 359 aa11.99□□□□□ -0.49
ABCA3-201ENST00000301732 DPY19L4Q7Z388 723 aa11.99□□□□□ -0.49
ABCA3-201ENST00000301732 C3orf58Q8NDZ4 430 aa11.99□□□□□ -0.49
ABCA3-201ENST00000301732 MICU1Q9BPX6 476 aa11.99□□□□□ -0.49
ABCA3-201ENST00000301732 CARS2Q9HA77 564 aaKnown RBP11.99□□□□□ -0.49
ABCA3-201ENST00000301732 OXSMQ9NWU1 459 aa11.99□□□□□ -0.49
ABCA3-201ENST00000301732 ELOVL2Q9NXB9 296 aa11.99□□□□□ -0.49
ABCA3-201ENST00000301732 TAS2R10Q9NYW0 307 aa11.99□□□□□ -0.49
ABCA3-201ENST00000301732 ADAMTS6Q9UKP5 1117 aa11.99□□□□□ -0.49
ABCA3-201ENST00000301732 CEMIPQ8WUJ3 1361 aa11.99□□□□□ -0.49
ABCA3-201ENST00000301732 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.99□□□□□ -0.49
ABCA3-201ENST00000301732 SRRM3A6NNA2 597 aaPredicted RBP11.99□□□□□ -0.49
ABCA3-201ENST00000301732 K7EPI3 171 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms