RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 OR7A17O14581 309 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 KMOO15229 486 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 RAD51BO15315 384 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 AIREO43918 545 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 NDUFS3O75489 264 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 MED26O95402 600 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 SERPINA1P01009 418 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 ACPPP15309 386 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 MAPKAPK2P49137 400 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 TTPAP49638 278 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 HTR6P50406 440 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 TBX4P57082 545 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 CHRNEQ04844 493 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 RING1Q06587 406 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 MTAPQ13126 283 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 SLC13A2Q13183 592 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 SERINC3Q13530 473 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 LAPTM5Q13571 262 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 GAS6Q14393 721 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 DGKKQ5KSL6 1271 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 TPRG1LQ5T0D9 272 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 DESI1Q6ICB0 168 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 IL27RAQ6UWB1 636 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 TPGS1Q6ZTW0 290 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 ZDHHC21Q8IVQ6 265 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 SFTPA1Q8IWL2 248 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 METTL4Q8N3J2 472 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 TTC29Q8NA56 475 aaPredicted RBP9.98□□□□□ -0.81
UPF3B-201ENST00000276201 ZNF540Q8NDQ6 660 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 CD200R1Q8TD46 325 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 MYDGFQ969H8 173 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 HHIPQ96QV1 700 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 DPY30Q9C005 99 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 CEP44Q9C0F1 390 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 TNKS2Q9H2K2 1166 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 IKZF5Q9H5V7 419 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 POLE4Q9NR33 117 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 VNN3Q9NY84 501 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 CD274Q9NZQ7 290 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 MPP6Q9NZW5 540 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 TRPS1Q9UHF7 1281 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 RNF6Q9Y252 685 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 ARIH1Q9Y4X5 557 aaPredicted RBP9.98□□□□□ -0.81
UPF3B-201ENST00000276201 KLK4Q9Y5K2 254 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 ARL5AQ9Y689 179 aa9.98□□□□□ -0.81
UPF3B-201ENST00000276201 A0A075B6Q4 140 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 NEDD8-MDP1E9PL57 170 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 H7C0S8 307 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 IDH3BO43837 385 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 PRAMEF11O60813 436 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 WBP4O75554 376 aaKnown RBP9.97□□□□□ -0.81
UPF3B-201ENST00000276201 DLGAP3O95886 979 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 APOA1P02647 267 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 KRT8P05787 483 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 PGRP06401 933 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 NCF1P14598 390 aaPredicted RBP9.97□□□□□ -0.81
UPF3B-201ENST00000276201 PRKACGP22612 351 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 FMO4P31512 558 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 S100A5P33763 92 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 KRT20P35900 424 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 DDOSTP39656 456 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 CLK1P49759 484 aaKnown RBP9.97□□□□□ -0.81
UPF3B-201ENST00000276201 ARPC4P59998 168 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 MAXP61244 160 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 ABRQ12979 859 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 MAPK11Q15759 364 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 CACHD1Q5VU97 1274 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 ERAP2Q6P179 960 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 ERICH5Q6P6B1 374 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 SCIMPQ6UWF3 145 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 GDPD3Q7L5L3 318 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 GOLGA7Q7Z5G4 137 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 ADAMTSL2Q86TH1 951 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 UBQLNLQ8IYU4 475 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 NAT16Q8N8M0 369 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 PNPLA1Q8N8W4 532 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 OR13C4Q8NGS5 318 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 OR6F1Q8NGZ6 308 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 CAPSLQ8WWF8 208 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 FAM120BQ96EK7 910 aaKnown RBP9.97□□□□□ -0.81
UPF3B-201ENST00000276201 CCDC97Q96F63 343 aaPredicted RBP9.97□□□□□ -0.81
UPF3B-201ENST00000276201 CRELD1Q96HD1 420 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 HRASLS5Q96KN8 279 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 PRRX2Q99811 253 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 CDADC1Q9BWV3 514 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 BBS2Q9BXC9 721 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 SLC29A3Q9BZD2 475 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 PCDH12Q9NPG4 1184 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 SPATA6Q9NWH7 488 aaPredicted RBP9.97□□□□□ -0.81
UPF3B-201ENST00000276201 PSORS1C1Q9UIG5 152 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 STOML2Q9UJZ1 356 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 ZNF221Q9UK13 617 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 RPS6KA6Q9UK32 745 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 UTS2RQ9UKP6 389 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 CACNA1IQ9P0X4 2223 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 WDFY4Q6ZS81 3184 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 ZNF106Q9H2Y7 1883 aaKnown RBP9.97□□□□□ -0.81
UPF3B-201ENST00000276201 M0R082 166 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 GFRA2O00451 464 aa9.97□□□□□ -0.81
UPF3B-201ENST00000276201 DSCR3O14972 297 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms