RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 USP22Q9UPT9 525 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 PCDHGB5Q9Y5G0 923 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 SDK1Q7Z5N4 2213 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 A0A0G2JN53 185 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 SLC35G4P0C7Q5 338 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 SAGP10523 405 aaPredicted RBP11.2□□□□□ -0.62
VPS33A-201ENST00000267199 PPM1AP35813 382 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 MAGEA11P43364 429 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 GMFBP60983 142 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 NOGQ13253 232 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 C10orf62Q5T681 223 aaPredicted RBP11.2□□□□□ -0.62
VPS33A-201ENST00000267199 LIPKQ5VXJ0 399 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 TMEM220Q6QAJ8 160 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 PAQR9Q6ZVX9 377 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 CHST9Q7L1S5 443 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 RETREG3Q86VR2 466 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 AUTS2Q8WXX7 1259 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 TMEM125Q96AQ2 219 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 GSTO2Q9H4Y5 243 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 ELAC1Q9H777 363 aaKnown RBP11.2□□□□□ -0.62
VPS33A-201ENST00000267199 PRDM8Q9NQV8 689 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 SLAMF8Q9P0V8 285 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 VPS29Q9UBQ0 182 aa11.2□□□□□ -0.62
VPS33A-201ENST00000267199 OR2B3O76000 313 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 HLA-DQA2P01906 255 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 GJA1P17302 382 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 POLR2IP36954 125 aaKnown RBP11.19□□□□□ -0.62
VPS33A-201ENST00000267199 CLK3P49761 638 aaKnown RBP11.19□□□□□ -0.62
VPS33A-201ENST00000267199 RGS8P57771 180 aaPredicted RBP11.19□□□□□ -0.62
VPS33A-201ENST00000267199 HEPACAMQ14CZ8 416 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 CYBRD1Q53TN4 286 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 CYP4V2Q6ZWL3 525 aaPredicted RBP11.19□□□□□ -0.62
VPS33A-201ENST00000267199 SCD5Q86SK9 330 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 IFNL1Q8IU54 200 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 ARHGAP12Q8IWW6 846 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 MFSD2AQ8NA29 543 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 DNAJB8Q8NHS0 232 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 SMG7Q92540 1137 aaKnown RBP11.19□□□□□ -0.62
VPS33A-201ENST00000267199 RPL3LQ92901 407 aaKnown RBP11.19□□□□□ -0.62
VPS33A-201ENST00000267199 SLC35A5Q9BS91 424 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 GPR83Q9NYM4 423 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 STON1Q9Y6Q2 735 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 MYADML2A6NDP7 307 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 CCL16O15467 120 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 CHST10O43529 356 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 PCDH7O60245 1069 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 SLC6A4P31645 630 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 DCTP40126 519 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 GATMP50440 423 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 APLP1P51693 650 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 ABRAXAS2Q15018 415 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 NFKBIDQ8NI38 313 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 CD99L2Q8TCZ2 262 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 GPR62Q9BZJ7 368 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 ZBTB20Q9HC78 741 aaPredicted RBP11.19□□□□□ -0.62
VPS33A-201ENST00000267199 SDR39U1Q9NRG7 319 aaPredicted RBP11.19□□□□□ -0.62
VPS33A-201ENST00000267199 MKL2Q9ULH7 1088 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 ANKRD33BA6NCL7 494 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 STK25O00506 426 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 HPRP00739 348 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 TGFB1P01137 390 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 FGBP02675 491 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 PRDX3P30048 256 aaKnown RBP11.19□□□□□ -0.62
VPS33A-201ENST00000267199 OMPP47874 163 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 NPRL3Q12980 569 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 DUOXA1Q1HG43 343 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 OR4K1Q8NGD4 311 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 OR2AP1Q8NGE2 309 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 ZSCAN5AQ9BUG6 496 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 CPNE5Q9HCH3 593 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 ZNF282Q9UDV7 671 aaPredicted RBP11.19□□□□□ -0.62
VPS33A-201ENST00000267199 DPP7Q9UHL4 492 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 A6NL46 340 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 CA12O43570 354 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 TOXO94900 526 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 NPPAP01160 153 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 GPX3P22352 226 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 CDK5R2Q13319 367 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 LDLRAD1Q5T700 205 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 OR8J3Q8NGG0 315 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 CCDC3Q9BQI4 270 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 ANKHQ9HCJ1 492 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 NUFIP1Q9UHK0 495 aaKnown RBP11.19□□□□□ -0.62
VPS33A-201ENST00000267199 ENPP5Q9UJA9 477 aa11.19□□□□□ -0.62
VPS33A-201ENST00000267199 STRCP1A6NGW2 1772 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 INMT-MINDY4F8WBC2 141 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 AQP9O43315 295 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 DNAJB5O75953 348 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 PTX3P26022 381 aaPredicted RBP11.18□□□□□ -0.62
VPS33A-201ENST00000267199 CD40LGP29965 261 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 SHMT2P34897 504 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 ZNF81P51508 661 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 DEFA5Q01523 94 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 OLFML2AQ68BL7 652 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 TTC9BQ8N6N2 239 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 SLC43A3Q8NBI5 491 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 LSM14AQ8ND56 463 aaKnown RBP11.18□□□□□ -0.62
VPS33A-201ENST00000267199 IMP3Q9NV31 184 aaKnown RBP11.18□□□□□ -0.62
VPS33A-201ENST00000267199 CMAHPQ9Y471 501 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 PCDHGB6Q9Y5F9 930 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms