RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 CHAF1BQ13112 559 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 NKAIN1Q4KMZ8 207 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 DEFB134Q4QY38 66 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 TCTE1Q5JU00 501 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 BROXQ5VW32 411 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 ZNF385CQ66K41 422 aaPredicted RBP6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 TLDC1Q6P9B6 456 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 LRRC70Q7Z2Q7 622 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 GOLGA7Q7Z5G4 137 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 ASPGQ86U10 573 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 TCAIMQ8N3R3 496 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 TMEM151AQ8N4L1 468 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 AMER2Q8N7J2 671 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 OR5T3Q8NGG3 340 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 COL26A1Q96A83 441 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 MMABQ96EY8 250 aaPredicted RBP6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 TMEM237Q96Q45 408 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 MRPL57Q9BQC6 102 aaKnown RBP6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 AIF1LQ9BQI0 150 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 DPH1Q9BZG8 443 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 CHRNA10Q9GZZ6 450 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 KLHL31Q9H511 634 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 SOX17Q9H6I2 414 aaPredicted RBP6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 HCN3Q9P1Z3 774 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 IFT80Q9P2H3 777 aaPredicted RBP6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 SRPK3Q9UPE1 567 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 KLK4Q9Y5K2 254 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 AP1M2Q9Y6Q5 423 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 PCSK5Q92824 1860 aa6.9□□□□□ -1.31
DEPDC1B-201ENST00000265036 C9J4A7 227 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 SGK494L7N484 410 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 E2F3O00716 465 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 SMIM24O75264 130 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 ALOX12BO75342 701 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 RDH16O75452 317 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 RBP1P09455 135 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 EPB42P16452 691 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 GGT5P36269 586 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 ALDH18A1P54886 795 aaKnown RBP6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 GTF2H2Q13888 395 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 NAA25Q14CX7 972 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 NCF4Q15080 339 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 CPSF6Q16630 551 aaKnown RBP eCLIP6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 MUM1Q2TAK8 710 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 PRTGQ2VWP7 1150 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 VWA2Q5GFL6 755 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 FAAH2Q6GMR7 532 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 GTF2H2CQ6P1K8 395 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 TMIGD1Q6UXZ0 262 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 TIFABQ6ZNK6 161 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 COX15Q7KZN9 410 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 CCDC91Q7Z6B0 441 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 TRABD2AQ86V40 505 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 PDSS2Q86YH6 399 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 TDRPQ86YL5 185 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 MREGQ8N565 214 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 EXTL1Q92935 676 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 ZNF285Q96NJ3 590 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 MECRQ9BV79 373 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 SHCBP1LQ9BZQ2 653 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 DRC3Q9H069 523 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 NOL11Q9H8H0 719 aaKnown RBP6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 IPPKQ9H8X2 491 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 ACTR8Q9H981 624 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 ZBTB26Q9HCK0 441 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 ANKMY1Q9P2S6 941 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 TNRC6AQ8NDV7 1962 aaKnown RBP6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 TRBC2A0A5B9 178 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 CDC14CA4D256 554 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 SAP18O00422 153 aaKnown RBP6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 DSCR3O14972 297 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 DLX3O60479 287 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 SRPX2O60687 465 aaPredicted RBP6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 DNAJB6O75190 326 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 GLRA3O75311 464 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 SUPT7LO94864 414 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 CAPN1P07384 714 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 ZNF888P0CJ79 500 aaPredicted RBP6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 C1GALT1C1LP0DN25 315 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 COL6A2P12110 1019 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 AGXTP21549 392 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 HNRNPH1P31943 449 aaKnown RBP6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 OTX2P32243 289 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 GCGRP47871 477 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 SCTRP47872 440 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 DCDP81605 110 aaKnown RBP6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 RBBP7Q16576 425 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 TCHHL1Q5QJ38 904 aaPredicted RBP6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 MFSD4BQ5TF39 518 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 SH2D5Q6ZV89 423 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 VN1R5Q7Z5H4 357 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 BPHLQ86WA6 291 aaPredicted RBP6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 CCNYL1Q8N7R7 359 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 ARMC2Q8NEN0 867 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 OR4K1Q8NGD4 311 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 UBTD2Q8WUN7 234 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 ATP6V1E2Q96A05 226 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 FAM111AQ96PZ2 611 aa6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 MTERF1Q99551 399 aaKnown RBP6.89□□□□□ -1.31
DEPDC1B-201ENST00000265036 AICDAQ9GZX7 198 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms