RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 CATSPEREQ5SY80 951 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 TMEM205Q6UW68 189 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 ISLR2Q6UXK2 745 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 THOC6Q86W42 341 aaKnown RBP15.22■□□□□ 0.03
USE1-201ENST00000263897 KBTBD2Q8IY47 623 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 FAM26EQ8N5C1 309 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 CISD2Q8N5K1 135 aaKnown RBP15.22■□□□□ 0.03
USE1-201ENST00000263897 OR51Q1Q8NH59 317 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 CDKL2Q92772 493 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 NEIL2Q969S2 332 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 SNRNP40Q96DI7 357 aaKnown RBP15.22■□□□□ 0.03
USE1-201ENST00000263897 C19orf60Q96EN9 201 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 LMF1Q96S06 567 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 WDR77Q9BQA1 342 aaPredicted RBP15.22■□□□□ 0.03
USE1-201ENST00000263897 ILKAPQ9H0C8 392 aaPredicted RBP15.22■□□□□ 0.03
USE1-201ENST00000263897 ANKHQ9HCJ1 492 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 GPAMQ9HCL2 828 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 CTNNAL1Q9UBT7 734 aa15.22■□□□□ 0.03
USE1-201ENST00000263897 IGHV1-45A0A0A0MS14 117 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 TCRBV9S1A1TA0A576 114 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 NPEPPSL1A6NEC2 478 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 TCP11X1B4DZS4 312 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 SGK494L7N484 410 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 JRKO75564 520 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 KLHL18O94889 574 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 SLC35G6P0C7Q6 338 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 PRR35P0CG20 571 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 EFNA3P52797 238 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 SLC12A2P55011 1212 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 CAV1Q03135 178 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 PWP1Q13610 501 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 TRADDQ15628 312 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 ZNF572Q7Z3I7 529 aaPredicted RBP15.21■□□□□ 0.03
USE1-201ENST00000263897 CUZD1Q86UP6 607 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 SHISA5Q8N114 240 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 TBC1D19Q8N5T2 526 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 ZNF740Q8NDX6 193 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 DNAJB14Q8TBM8 379 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 PPP4R1Q8TF05 950 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 SLC5A11Q8WWX8 675 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 PSMF1Q92530 271 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 MOCOSQ96EN8 888 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 CYTH2Q99418 400 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 VN1R1Q9GZP7 353 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 ZNF700Q9H0M5 742 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 RAB17Q9H0T7 212 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 ASF1BQ9NVP2 202 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 MAP10Q9P2G4 905 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 SLC22A14Q9Y267 594 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 OARD1Q9Y530 152 aa15.21■□□□□ 0.03
USE1-201ENST00000263897 SCN2AQ99250 2005 aa15.21■□□□□ 0.02
USE1-201ENST00000263897 SPTAN1Q13813 2472 aaKnown RBP15.2■□□□□ 0.02
USE1-201ENST00000263897 FAM159BA6NKW6 160 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 WISP3O95389 354 aaPredicted RBP15.2■□□□□ 0.02
USE1-201ENST00000263897 C1QAP02745 245 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 SERPINA7P05543 415 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 CYC1P08574 325 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 XCR1P46094 333 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 SCTRP47872 440 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 GLRBP48167 497 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 HNMTP50135 292 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 GPX6P59796 221 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 EEF1A2Q05639 463 aaKnown RBP15.2■□□□□ 0.02
USE1-201ENST00000263897 MFAP5Q13361 173 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 TSNQ15631 228 aaKnown RBP15.2■□□□□ 0.02
USE1-201ENST00000263897 ADAMTSL2Q86TH1 951 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 PDSS2Q86YH6 399 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 AFAP1L2Q8N4X5 818 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 ZCCHC10Q8TBK6 192 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 FBXO25Q8TCJ0 367 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 METTL21AQ8WXB1 218 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 TSPAN17Q96FV3 270 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 IMMP1LQ96LU5 166 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 TSNARE1Q96NA8 513 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 CPNE1Q99829 537 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 EGFL8Q99944 293 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 PHACTR1Q9C0D0 580 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 DERL2Q9GZP9 239 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 SPNS1Q9H2V7 528 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 EPS8L2Q9H6S3 715 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 CAB39LQ9H9S4 337 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 PELI2Q9HAT8 420 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 RIC8BQ9NVN3 520 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 HCN3Q9P1Z3 774 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 TXNDC16Q9P2K2 825 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 ZFP69BQ9UJL9 534 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 NAALAD2Q9Y3Q0 740 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 DYRK1BQ9Y463 629 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 PCDHGA10Q9Y5H3 936 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 CSAG2Q9Y5P2 127 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 COPG1Q9Y678 874 aaKnown RBP15.2■□□□□ 0.02
USE1-201ENST00000263897 KCNE2Q9Y6J6 123 aa15.2■□□□□ 0.02
USE1-201ENST00000263897 HIVEP3Q5T1R4 2406 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 SPTBN1Q01082 2364 aaKnown RBP15.19■□□□□ 0.02
USE1-201ENST00000263897 NDUFS4O43181 175 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 C8orf89P0DMQ9 161 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 ICAM2P13598 275 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 AHRP35869 848 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 MAGEA4P43358 317 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 USP10Q14694 798 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms