RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 SMAD5Q99717 465 aaKnown RBP21.77■■□□□ 1.08
LSM4-201ENST00000252816 TMEM79Q9BSE2 394 aa21.77■■□□□ 1.08
LSM4-201ENST00000252816 TGIF2Q9GZN2 237 aa21.77■■□□□ 1.08
LSM4-201ENST00000252816 PELI2Q9HAT8 420 aa21.77■■□□□ 1.08
LSM4-201ENST00000252816 MKKSQ9NPJ1 570 aaPredicted RBP21.77■■□□□ 1.08
LSM4-201ENST00000252816 ZNF451Q9Y4E5 1061 aa21.77■■□□□ 1.08
LSM4-201ENST00000252816 KCNE2Q9Y6J6 123 aa21.77■■□□□ 1.08
LSM4-201ENST00000252816 H0YIG0 161 aa21.76■■□□□ 1.07
LSM4-201ENST00000252816 WDR47O94967 919 aa21.76■■□□□ 1.07
LSM4-201ENST00000252816 NSA2O95478 260 aaKnown RBP21.76■■□□□ 1.07
LSM4-201ENST00000252816 SCTRP47872 440 aa21.76■■□□□ 1.07
LSM4-201ENST00000252816 AVPR1BP47901 424 aa21.76■■□□□ 1.07
LSM4-201ENST00000252816 EFNA3P52797 238 aa21.76■■□□□ 1.07
LSM4-201ENST00000252816 BMPR2Q13873 1038 aa21.76■■□□□ 1.07
LSM4-201ENST00000252816 FBXO48Q5FWF7 155 aa21.76■■□□□ 1.07
LSM4-201ENST00000252816 RAPH1Q70E73 1250 aa21.76■■□□□ 1.07
LSM4-201ENST00000252816 PDSS2Q86YH6 399 aa21.76■■□□□ 1.07
LSM4-201ENST00000252816 KIAA1191Q96A73 305 aa21.76■■□□□ 1.07
LSM4-201ENST00000252816 C8orf44Q96CB5 159 aa21.76■■□□□ 1.07
LSM4-201ENST00000252816 FMO2Q99518 471 aa21.76■■□□□ 1.07
LSM4-201ENST00000252816 CDC42EP4Q9H3Q1 356 aaKnown RBP21.76■■□□□ 1.07
LSM4-201ENST00000252816 ATP13A2Q9NQ11 1180 aa21.76■■□□□ 1.07
LSM4-201ENST00000252816 PCDHGB7Q9Y5F8 929 aa21.76■■□□□ 1.07
LSM4-201ENST00000252816 NUP210LQ5VU65 1888 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 IDSB3KWA1 339 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 SGK494L7N484 410 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 NDUFS4O43181 175 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 SLC35G6P0C7Q6 338 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 VARSP26640 1264 aaKnown RBP21.75■■□□□ 1.07
LSM4-201ENST00000252816 CRABP2P29373 138 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 EMP2P54851 167 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 SOX8P57073 446 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 AIMP2Q13155 320 aaKnown RBP21.75■■□□□ 1.07
LSM4-201ENST00000252816 MYBPC3Q14896 1274 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 NADK2Q4G0N4 442 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 MROH9Q5TGP6 573 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 ATG9BQ674R7 924 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 CEP128Q6ZU80 1094 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 ANKRD53Q8N9V6 530 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 ESAMQ96AP7 390 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 CYTH2Q99418 400 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 FUT8Q9BYC5 575 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 ACSS3Q9H6R3 686 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 IGSF5Q9NSI5 407 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 C14orf105Q9NVL8 296 aa21.75■■□□□ 1.07
LSM4-201ENST00000252816 G3BP2Q9UN86 482 aaKnown RBP21.75■■□□□ 1.07
LSM4-201ENST00000252816 JRKO75564 520 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 BMP10O95393 424 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 ACSL3O95573 720 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 PHBP35232 272 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 GGT5P36269 586 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 CSRP3P50461 194 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 PWP1Q13610 501 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 UAP1Q16222 522 aaPredicted RBP21.74■■□□□ 1.07
LSM4-201ENST00000252816 TUBB8Q3ZCM7 444 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 CDKL4Q5MAI5 379 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 VWA5B1Q5TIE3 1220 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 SLCO4C1Q6ZQN7 724 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 ISCA2Q86U28 154 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 TCAIMQ8N3R3 496 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 AFAP1L2Q8N4X5 818 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 TBC1D19Q8N5T2 526 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 CEP112Q8N8E3 955 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 PDPRQ8NCN5 879 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 AIF1LQ9BQI0 150 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 TSPYL1Q9H0U9 437 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 ALG9Q9H6U8 611 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 ZNF552Q9H707 407 aaPredicted RBP21.74■■□□□ 1.07
LSM4-201ENST00000252816 ANKHQ9HCJ1 492 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 WWOXQ9NZC7 414 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 HCN3Q9P1Z3 774 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 ZFP69BQ9UJL9 534 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 RNF112Q9ULX5 631 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 SLC22A7Q9Y694 548 aa21.74■■□□□ 1.07
LSM4-201ENST00000252816 SCN3AQ9NY46 2000 aa21.73■■□□□ 1.07
LSM4-201ENST00000252816 NBASA2RRP1 2371 aa21.73■■□□□ 1.07
LSM4-201ENST00000252816 KLHL18O94889 574 aa21.73■■□□□ 1.07
LSM4-201ENST00000252816 SERPIND1P05546 499 aa21.73■■□□□ 1.07
LSM4-201ENST00000252816 ACPPP15309 386 aa21.73■■□□□ 1.07
LSM4-201ENST00000252816 TFEBP19484 476 aa21.73■■□□□ 1.07
LSM4-201ENST00000252816 AHRP35869 848 aa21.73■■□□□ 1.07
LSM4-201ENST00000252816 HSPA7P48741 367 aa21.73■■□□□ 1.07
LSM4-201ENST00000252816 Q0VFX4 171 aa21.73■■□□□ 1.07
LSM4-201ENST00000252816 FAAH2Q6GMR7 532 aa21.73■■□□□ 1.07
LSM4-201ENST00000252816 SULT1C3Q6IMI6 304 aa21.73■■□□□ 1.07
LSM4-201ENST00000252816 TBC1D1Q86TI0 1168 aaPredicted RBP21.73■■□□□ 1.07
LSM4-201ENST00000252816 OR51Q1Q8NH59 317 aa21.73■■□□□ 1.07
LSM4-201ENST00000252816 NT5CQ8TCD5 201 aa21.73■■□□□ 1.07
LSM4-201ENST00000252816 EXT2Q93063 718 aa21.73■■□□□ 1.07
LSM4-201ENST00000252816 CD274Q9NZQ7 290 aa21.73■■□□□ 1.07
LSM4-201ENST00000252816 PTBP2Q9UKA9 531 aaKnown RBP21.73■■□□□ 1.07
LSM4-201ENST00000252816 NAALAD2Q9Y3Q0 740 aa21.73■■□□□ 1.07
LSM4-201ENST00000252816 ZNF860A6NHJ4 632 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 MAP2K7O14733 419 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 PRAMEF4O60810 478 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 RDH16O75452 317 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 B3GALT4O96024 378 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 HEXBP07686 556 aa21.72■■□□□ 1.07
LSM4-201ENST00000252816 LTA4HP09960 611 aaKnown RBP21.72■■□□□ 1.07
LSM4-201ENST00000252816 C1GALT1C1LP0DN25 315 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms