RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 STMN1P16949 149 aa20.04■□□□□ 0.8
HCFC1R1-201ENST00000248089 CXCR2P25025 360 aa20.04■□□□□ 0.8
HCFC1R1-201ENST00000248089 STX2P32856 288 aa20.04■□□□□ 0.8
HCFC1R1-201ENST00000248089 SOX8P57073 446 aa20.04■□□□□ 0.8
HCFC1R1-201ENST00000248089 SLMAPQ14BN4 828 aa20.04■□□□□ 0.8
HCFC1R1-201ENST00000248089 WHAMMP3Q1A5X7 153 aa20.04■□□□□ 0.8
HCFC1R1-201ENST00000248089 KBTBD12Q3ZCT8 623 aa20.04■□□□□ 0.8
HCFC1R1-201ENST00000248089 ZNF740Q8NDX6 193 aa20.04■□□□□ 0.8
HCFC1R1-201ENST00000248089 FBF1Q8TES7 1133 aa20.04■□□□□ 0.8
HCFC1R1-201ENST00000248089 TM4SF19Q96DZ7 209 aa20.04■□□□□ 0.8
HCFC1R1-201ENST00000248089 FAM129AQ9BZQ8 928 aa20.04■□□□□ 0.8
HCFC1R1-201ENST00000248089 DERL2Q9GZP9 239 aa20.04■□□□□ 0.8
HCFC1R1-201ENST00000248089 SPNS1Q9H2V7 528 aa20.04■□□□□ 0.8
HCFC1R1-201ENST00000248089 ANKHQ9HCJ1 492 aa20.04■□□□□ 0.8
HCFC1R1-201ENST00000248089 MKL2Q9ULH7 1088 aa20.04■□□□□ 0.8
HCFC1R1-201ENST00000248089 SLC22A14Q9Y267 594 aa20.04■□□□□ 0.8
HCFC1R1-201ENST00000248089 TRBC2A0A5B9 178 aa20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 H0YIG0 161 aa20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 SGK494L7N484 410 aa20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 FAM155BO75949 473 aa20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 HPP00738 406 aa20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 CCDC166P0CW27 439 aa20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 CDKL1Q00532 357 aa20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 EFTUD2Q15029 972 aaKnown RBP eCLIP20.03■□□□□ 0.85e-6■■■■□ 19.4
HCFC1R1-201ENST00000248089 C18orf21Q32NC0 220 aaPredicted RBP20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 CYS1Q717R9 158 aa20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 ATCAYQ86WG3 371 aa20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 OR4K1Q8NGD4 311 aa20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 TM9SF4Q92544 642 aa20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 PNPLA2Q96AD5 504 aa20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 THOC3Q96J01 351 aaKnown RBP20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 TGIF2Q9GZN2 237 aa20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 LHPPQ9H008 270 aa20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 ZBTB20Q9HC78 741 aaPredicted RBP20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 LRRC4CQ9HCJ2 640 aa20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 FLNBO75369 2602 aaKnown RBP20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 RELNP78509 3460 aa20.03■□□□□ 0.8
HCFC1R1-201ENST00000248089 SHANK1Q9Y566 2161 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 NSG1A0A0A6YYJ2 146 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 ZNF860A6NHJ4 632 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 RDH16O75452 317 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 JRKO75564 520 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 WDR47O94967 919 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 C1QAP02745 245 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 COX6A1P12074 109 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 SPRP35270 261 aaPredicted RBP20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 HNMTP50135 292 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 GUCY2DQ02846 1103 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 Q0VFX4 171 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 MINDY4Q4G0A6 757 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 PRR30Q53SZ7 412 aaPredicted RBP20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 AGAP7PQ5VUJ5 663 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 ATG9BQ674R7 924 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 ZADH2Q8N4Q0 377 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 Q8NA96 180 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 OR51Q1Q8NH59 317 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 MOCOSQ96EN8 888 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 AGAP4Q96P64 663 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 ILKAPQ9H0C8 392 aaPredicted RBP20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 PELI2Q9HAT8 420 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 NAALAD2Q9Y3Q0 740 aa20.02■□□□□ 0.8
HCFC1R1-201ENST00000248089 KLHL18O94889 574 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 WISP3O95389 354 aaPredicted RBP20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 BMP10O95393 424 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 XCR1P46094 333 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 RAB10P61026 200 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 REEP5Q00765 189 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 RGS1Q08116 209 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 TGFBIQ15582 683 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 GRTP1Q5TC63 336 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 NXPE4Q6UWF7 544 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 RAPH1Q70E73 1250 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 NDUFAF7Q7L592 441 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 PDSS2Q86YH6 399 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 SHISA5Q8N114 240 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 EXT2Q93063 718 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 AIF1LQ9BQI0 150 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 RBCK1Q9BYM8 510 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 WWOXQ9NZC7 414 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 B3GNT3Q9Y2A9 372 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 KCNE2Q9Y6J6 123 aa20.01■□□□□ 0.79
HCFC1R1-201ENST00000248089 RP1L1Q8IWN7 2480 aaPredicted RBP20■□□□□ 0.79
HCFC1R1-201ENST00000248089 VPS4BO75351 444 aa20■□□□□ 0.79
HCFC1R1-201ENST00000248089 UQCRHP07919 91 aa20■□□□□ 0.79
HCFC1R1-201ENST00000248089 CD1DP15813 335 aa20■□□□□ 0.79
HCFC1R1-201ENST00000248089 GMPRP36959 345 aa20■□□□□ 0.79
HCFC1R1-201ENST00000248089 GDF5P43026 501 aa20■□□□□ 0.79
HCFC1R1-201ENST00000248089 SCTRP47872 440 aa20■□□□□ 0.79
HCFC1R1-201ENST00000248089 EFNA3P52797 238 aa20■□□□□ 0.79
HCFC1R1-201ENST00000248089 RBBP5Q15291 538 aaKnown RBP20■□□□□ 0.79
HCFC1R1-201ENST00000248089 ZKSCAN8Q15776 578 aaPredicted RBP20■□□□□ 0.79
HCFC1R1-201ENST00000248089 IGFL3Q6UXB1 125 aa20■□□□□ 0.79
HCFC1R1-201ENST00000248089 CMC1Q7Z7K0 106 aa20■□□□□ 0.79
HCFC1R1-201ENST00000248089 GPSM1Q86YR5 675 aa20■□□□□ 0.79
HCFC1R1-201ENST00000248089 KBTBD2Q8IY47 623 aa20■□□□□ 0.79
HCFC1R1-201ENST00000248089 METTL21AQ8WXB1 218 aa20■□□□□ 0.79
HCFC1R1-201ENST00000248089 RHBDF1Q96CC6 855 aa20■□□□□ 0.79
HCFC1R1-201ENST00000248089 MRRFQ96E11 262 aaKnown RBP20■□□□□ 0.79
HCFC1R1-201ENST00000248089 SARGQ9BW04 601 aa20■□□□□ 0.79
HCFC1R1-201ENST00000248089 VN1R1Q9GZP7 353 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms