RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 ALAS2P22557 587 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 MMP11P24347 488 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 CNTFP26441 200 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 SKIV2L2P42285 1042 aaKnown RBP7.47□□□□□ -1.21
PNKP-229ENST00000637897 CCT5P48643 541 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 SERPINB9P50453 376 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 SEC24CP53992 1094 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 CDKN2DP55273 166 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 HNRNPH2P55795 449 aaKnown RBP7.47□□□□□ -1.21
PNKP-229ENST00000637897 MRPL49Q13405 166 aaKnown RBP7.47□□□□□ -1.21
PNKP-229ENST00000637897 FRG1Q14331 258 aaKnown RBP7.47□□□□□ -1.21
PNKP-229ENST00000637897 INPP5JQ15735 1006 aaPredicted RBP7.47□□□□□ -1.21
PNKP-229ENST00000637897 KBTBD12Q3ZCT8 623 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 HSP90AA5PQ58FG0 334 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 VWA2Q5GFL6 755 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 GKAP1Q5VSY0 366 aaPredicted RBP7.47□□□□□ -1.21
PNKP-229ENST00000637897 ARMC3Q5W041 872 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 MRNIPQ6NTE8 343 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 TRMT10BQ6PF06 316 aaKnown RBP7.47□□□□□ -1.21
PNKP-229ENST00000637897 IGFL2Q6UWQ7 119 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 TMEM207Q6UWW9 146 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 IGFL3Q6UXB1 125 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 MED25Q71SY5 747 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 PRSS41Q7RTY9 318 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 VN1R4Q7Z5H5 301 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 CUZD1Q86UP6 607 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 SLC26A11Q86WA9 606 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 PLD3Q8IV08 490 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 CPNE9Q8IYJ1 553 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 GALNT16Q8N428 558 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 AMER3Q8N944 861 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 FBXO15Q8NCQ5 510 aaPredicted RBP7.47□□□□□ -1.21
PNKP-229ENST00000637897 C2CD4AQ8NCU7 369 aaPredicted RBP7.47□□□□□ -1.21
PNKP-229ENST00000637897 CPT1CQ8TCG5 803 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 CKAP2Q8WWK9 683 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 PSMF1Q92530 271 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 PTERQ96BW5 349 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 MTBPQ96DY7 904 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 ZNF317Q96PQ6 595 aaPredicted RBP7.47□□□□□ -1.21
PNKP-229ENST00000637897 NDNQ99608 321 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 TTC1Q99614 292 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 PLCD4Q9BRC7 762 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 AARSD1Q9BTE6 412 aaKnown RBP7.47□□□□□ -1.21
PNKP-229ENST00000637897 DPH7Q9BTV6 452 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 SOX17Q9H6I2 414 aaPredicted RBP7.47□□□□□ -1.21
PNKP-229ENST00000637897 SPATA7Q9P0W8 599 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 SAMD15Q9P1V8 674 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 FBXL4Q9UKA2 621 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 FBXO5Q9UKT4 447 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 SLC39A10Q9ULF5 831 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 RUVBL1Q9Y265 456 aaKnown RBP7.47□□□□□ -1.21
PNKP-229ENST00000637897 DHRS7Q9Y394 339 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 SCN3AQ9NY46 2000 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 SVILO95425 2214 aa7.47□□□□□ -1.21
PNKP-229ENST00000637897 DOPEY1Q5JWR5 2465 aa7.46□□□□□ -1.21
PNKP-229ENST00000637897 MAGEB16A2A368 324 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 HYKKA2RU49 373 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 OR2W5A6NFC9 320 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 FAM159BA6NKW6 160 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 TTLL8A6PVC2 850 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 C9J4A7 227 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 HAT1O14929 419 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 TM9SF1O15321 606 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 LCMT2O60294 686 aaKnown RBP7.46□□□□□ -1.22
PNKP-229ENST00000637897 FAM155BO75949 473 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 KRT38O76015 456 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 WISP2O76076 250 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 KLHL18O94889 574 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 C1QAP02745 245 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 AHSGP02765 367 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 ALBP02768 609 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 VIMP08670 466 aaKnown RBP7.46□□□□□ -1.22
PNKP-229ENST00000637897 SNRPAP09012 282 aaKnown RBP7.46□□□□□ -1.22
PNKP-229ENST00000637897 CREB1P16220 341 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 KRT4P19013 534 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 DRD4P21917 467 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 PPARGP37231 505 aaPredicted RBP7.46□□□□□ -1.22
PNKP-229ENST00000637897 FOLR3P41439 243 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 PNLIPRP1P54315 467 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 PRDX1Q06830 199 aaKnown RBP7.46□□□□□ -1.22
PNKP-229ENST00000637897 KLC1Q07866 573 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 CRYMQ14894 314 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 MYBPC3Q14896 1274 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 EFTUD2Q15029 972 aaKnown RBP eCLIP7.46□□□□□ -1.22
PNKP-229ENST00000637897 PHKG1Q16816 387 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 SYT16Q17RD7 645 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 SPANXN3Q5MJ09 141 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 ICE2Q659A1 982 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 ATG9BQ674R7 924 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 CASC4Q6P4E1 433 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 Q6ZS92 163 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 NEK10Q6ZWH5 1172 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 CNTN4Q8IWV2 1026 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 CTAGE3PQ8IX95 158 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 ANKRD42Q8N9B4 389 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 OR11G2Q8NGC1 345 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 STT3BQ8TCJ2 826 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 CDKL2Q92772 493 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 KCNJ9Q92806 393 aa7.46□□□□□ -1.22
PNKP-229ENST00000637897 FKBP10Q96AY3 582 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms