RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 ALDOCP09972 364 aaKnown RBP7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 H2AFB1P0C5Y9 115 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 H2AFB2P0C5Z0 115 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 HSMCR30P0CW71 290 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 SMIM10L2AP0DMW4 78 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 SMIM10L2BP0DMW5 78 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 ARSBP15848 533 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 KCNA5P22460 613 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 ATP5F1P24539 256 aaPredicted RBP7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 SLC1A2P43004 574 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 CHRNA4P43681 627 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 GSTM5P46439 218 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 AFF1P51825 1210 aaKnown RBP7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 PSPHP78330 225 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 MAD2L1BPQ15013 274 aaPredicted RBP7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 GPR68Q15743 365 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 SV2CQ496J9 727 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 XKR4Q5GH76 650 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 NOMO2Q5JPE7 1267 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 LCN1P1Q5VSP4 162 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 SAXO2Q658L1 398 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 ESRP1Q6NXG1 681 aaKnown RBP7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 SPESP1Q6UW49 350 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 C5orf46Q6UWT4 87 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 CUZD1Q86UP6 607 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 NLRP8Q86W28 1048 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 IFNEQ86WN2 208 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 NKAIN4Q8IVV8 208 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 ZNF565Q8N9K5 539 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 OR6J1Q8NGC5 347 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 PHOSPHO2Q8TCD6 241 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 POP5Q969H6 163 aaKnown RBP7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 MYLPFQ96A32 169 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 NUSAP1Q9BXS6 441 aaKnown RBP7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 GPR63Q9BZJ6 419 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 ABCG4Q9H172 646 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 TNKS2Q9H2K2 1166 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 NMUR1Q9HB89 426 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 GPBP1L1Q9HC44 474 aaPredicted RBP7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 ABCC13Q9NSE7 274 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 OLA1Q9NTK5 396 aaKnown RBP7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 ABCB8Q9NUT2 735 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 EXD2Q9NVH0 621 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 COPZ2Q9P299 210 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 CTSFQ9UBX1 484 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 KLF15Q9UIH9 416 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 TMEFF2Q9UIK5 374 aaPredicted RBP7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 BTRCQ9Y297 605 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 FIS1Q9Y3D6 152 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 LOC100506127A0A0U1RQW1 187 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 C17orf113A0A1B0GUU1 675 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 FAM95CA0A1B0GW59 222 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 MYBPHLA2RUH7 354 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 PMS2P1A4D2B8 440 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 A8MXK9 166 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 HHLA1C9JL84 531 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 DNASE2O00115 360 aaPredicted RBP7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 NUPL2O15504 423 aaKnown RBP7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 NDUFS6O75380 124 aaKnown RBP7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 SEC22BO75396 215 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 EEDO75530 441 aaKnown RBP7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 PGRP06401 933 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 HNRNPLP14866 589 aaKnown RBP eCLIP7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 GRK5P34947 590 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 PNPLA4P41247 253 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 TAS2R39P59534 338 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 EMX2Q04743 252 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 FSCN1Q16658 493 aaKnown RBP7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 TUSC1Q2TAM9 212 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 PROX2Q3B8N5 592 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 GLYR1Q49A26 553 aaPredicted RBP7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 ANKRD39Q53RE8 183 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 PDZK1Q5T2W1 519 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 LAIR1Q6GTX8 287 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 SLC27A4Q6P1M0 643 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 BEND4Q6ZU67 534 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 SNX20Q7Z614 316 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 TAC4Q86UU9 113 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 TOP6BLQ8N6T0 577 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 ATG16L2Q8NAA4 619 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 IPMKQ8NFU5 416 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 GPR151Q8TDV0 419 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 DNAJB3Q8WWF6 145 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 CCDC115Q96NT0 180 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 TRMOQ9BU70 441 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 FICDQ9BVA6 458 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 MND1Q9BWT6 205 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 LRRC3Q9BY71 257 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 TKTL2Q9H0I9 626 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 TTYH1Q9H313 450 aaPredicted RBP7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 POMKQ9H5K3 350 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 ESRP2Q9H6T0 727 aaKnown RBP7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 GAREM1Q9H706 876 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 FOLH1BQ9HBA9 442 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 RBFOX1Q9NWB1 397 aaKnown RBP7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 NDRG4Q9ULP0 352 aaKnown RBP7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 MGAT4AQ9UM21 535 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 EDARQ9UNE0 448 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 STUB1Q9UNE7 303 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 PCDHGA9Q9Y5G4 932 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms