RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 C1orf105O95561 183 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 CD247P20963 164 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 IDSP22304 550 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 ACVR2AP27037 513 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 BDKRB1P46663 353 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 ENTPD1P49961 510 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 CCR3P51677 355 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 VLDLRP98155 873 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 RAPSNQ13702 412 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 GRIN2CQ14957 1233 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 CPTPQ5TA50 214 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 ANXA8L1Q5VT79 327 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 ADNP2Q6IQ32 1131 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 FAHD1Q6P587 224 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 KLHL35Q6PF15 583 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 OTOP2Q7RTS6 562 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 C1orf52Q8N6N3 182 aaKnown RBP9.1□□□□□ -0.95
PDPN-212ENST00000621990 DRAXINQ8NBI3 349 aaPredicted RBP9.1□□□□□ -0.95
PDPN-212ENST00000621990 SETD9Q8NE22 299 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 SP7Q8TDD2 431 aaPredicted RBP9.1□□□□□ -0.95
PDPN-212ENST00000621990 ZFP90Q8TF47 636 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 FOXJ1Q92949 421 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 SH3KBP1Q96B97 665 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 C7orf34Q96L11 122 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 SGPP1Q9BX95 441 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 EHD1Q9H4M9 534 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 ATP6V1HQ9UI12 483 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 PSME2Q9UL46 239 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 NDRG4Q9ULP0 352 aaKnown RBP9.1□□□□□ -0.95
PDPN-212ENST00000621990 EXO1Q9UQ84 846 aaKnown RBP9.1□□□□□ -0.95
PDPN-212ENST00000621990 TMEM229AB2RXF0 380 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 SLC9A3R1O14745 358 aaPredicted RBP9.09□□□□□ -0.95
PDPN-212ENST00000621990 MITFO75030 526 aaPredicted RBP9.09□□□□□ -0.95
PDPN-212ENST00000621990 ANXA4P09525 319 aaPredicted RBP9.09□□□□□ -0.95
PDPN-212ENST00000621990 PDHA2P29803 388 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 TIA1P31483 386 aaKnown RBP eCLIP9.09□□□□□ -0.95
PDPN-212ENST00000621990 PCGF2P35227 344 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 HPCAL1P37235 193 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 ARHGDIAP52565 204 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 TPD52P55327 224 aaPredicted RBP9.09□□□□□ -0.95
PDPN-212ENST00000621990 C16orf72Q14CZ0 275 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 ZNF829Q3KNS6 432 aaPredicted RBP9.09□□□□□ -0.95
PDPN-212ENST00000621990 SLC16A12Q6ZSM3 486 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 ZNF765Q7L2R6 523 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 VTCN1Q7Z7D3 282 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 NPAS3Q8IXF0 933 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 LAS2Q8IYD9 372 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 NAT16Q8N8M0 369 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 FNDC8Q8TC99 324 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 WFIKKN2Q8TEU8 576 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 ZNF480Q8WV37 535 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 NEIL2Q969S2 332 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 REPS1Q96D71 796 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 HSH2DQ96JZ2 352 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 FOPNLQ96NB1 174 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 NODALQ96S42 347 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 CSF3RQ99062 836 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 MTG2Q9H4K7 406 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 IL23AQ9NPF7 189 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 SLC27A6Q9Y2P4 619 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 INSL6Q9Y581 213 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 KCNE2Q9Y6J6 123 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 DENND4AQ7Z401 1863 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 HOXC11O43248 304 aaPredicted RBP9.09□□□□□ -0.95
PDPN-212ENST00000621990 HNRNPA1P09651 372 aaKnown RBP eCLIP9.09□□□□□ -0.95
PDPN-212ENST00000621990 XPAP23025 273 aaPredicted RBP9.09□□□□□ -0.95
PDPN-212ENST00000621990 CLK3P49761 638 aaKnown RBP9.09□□□□□ -0.95
PDPN-212ENST00000621990 GAB1Q13480 694 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 DHCR24Q15392 516 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 RGNQ15493 299 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 SF1Q15637 639 aaKnown RBP9.09□□□□□ -0.95
PDPN-212ENST00000621990 PLPP4Q5VZY2 271 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 MED27Q6P2C8 311 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 TMEM220Q6QAJ8 160 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 LRRC56Q8IYG6 542 aaPredicted RBP9.09□□□□□ -0.95
PDPN-212ENST00000621990 VPS37AQ8NEZ2 397 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 VN1R2Q8NFZ6 395 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 THAP11Q96EK4 314 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 LINC00615Q96LM1 132 aaPredicted RBP9.09□□□□□ -0.95
PDPN-212ENST00000621990 EPYCQ99645 322 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 DPH2Q9BQC3 489 aaPredicted RBP9.09□□□□□ -0.95
PDPN-212ENST00000621990 BCL7BQ9BQE9 202 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 BHLHE41Q9C0J9 482 aaPredicted RBP9.09□□□□□ -0.95
PDPN-212ENST00000621990 DUSP21Q9H596 190 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 PREBQ9HCU5 417 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 FZD4Q9ULV1 537 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 PADI2Q9Y2J8 665 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 TSC22D4Q9Y3Q8 395 aa9.09□□□□□ -0.95
PDPN-212ENST00000621990 NUP214P35658 2090 aaPredicted RBP9.08□□□□□ -0.96
PDPN-212ENST00000621990 KIF26AQ9ULI4 1882 aaPredicted RBP9.08□□□□□ -0.96
PDPN-212ENST00000621990 H3BM21 787 aa9.08□□□□□ -0.96
PDPN-212ENST00000621990 MRPS14O60783 128 aaKnown RBP9.08□□□□□ -0.96
PDPN-212ENST00000621990 POU2F2P09086 479 aa9.08□□□□□ -0.96
PDPN-212ENST00000621990 NPPBP16860 134 aa9.08□□□□□ -0.96
PDPN-212ENST00000621990 DGKGP49619 791 aa9.08□□□□□ -0.96
PDPN-212ENST00000621990 MVDP53602 400 aa9.08□□□□□ -0.96
PDPN-212ENST00000621990 GP2P55259 537 aaKnown RBP9.08□□□□□ -0.96
PDPN-212ENST00000621990 TBPL1P62380 186 aa9.08□□□□□ -0.96
PDPN-212ENST00000621990 KCNJ10P78508 379 aa9.08□□□□□ -0.96
PDPN-212ENST00000621990 DDX39BQ13838 428 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms