RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 DUSP23Q9BVJ7 150 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 RHBGQ9H310 441 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 DMRT3Q9NQL9 472 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 AIG1Q9NVV5 245 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 TAGLN3Q9UI15 199 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 ZNF292O60281 2723 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 ARID1BQ8NFD5 2236 aaPredicted RBP21.36■■□□□ 1.01
ATG4D-209ENST00000588857 ARHGAP33O14559 1287 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 ZW10O43264 779 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 EPN2O95208 641 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 GRIA3P42263 894 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 NAA25Q14CX7 972 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 SLC5A12Q1EHB4 618 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 IL23RQ5VWK5 629 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 SPESP1Q6UW49 350 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 GATAD2AQ86YP4 633 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 PARP9Q8IXQ6 854 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.36■■□□□ 1.01
ATG4D-209ENST00000588857 SAP25Q8TEE9 199 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 ARRDC1-AS1Q9H2J1 176 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 IL21RQ9HBE5 538 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 LRIT1Q9P2V4 623 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 TMED5Q9Y3A6 229 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 GPR45Q9Y5Y3 372 aa21.36■■□□□ 1.01
ATG4D-209ENST00000588857 DNAH14Q0VDD8 3507 aa21.35■■□□□ 1.01
ATG4D-209ENST00000588857 PCDH15Q96QU1 1955 aa21.35■■□□□ 1.01
ATG4D-209ENST00000588857 UNC5CO95185 931 aa21.35■■□□□ 1.01
ATG4D-209ENST00000588857 GIMD1P0DJR0 217 aa21.35■■□□□ 1.01
ATG4D-209ENST00000588857 T-ENOLP0DO92 83 aa21.35■■□□□ 1.01
ATG4D-209ENST00000588857 EZRP15311 586 aaKnown RBP21.35■■□□□ 1.01
ATG4D-209ENST00000588857 CALB2P22676 271 aa21.35■■□□□ 1.01
ATG4D-209ENST00000588857 PPM1FP49593 454 aaPredicted RBP21.35■■□□□ 1.01
ATG4D-209ENST00000588857 CCT8P50990 548 aa21.35■■□□□ 1.01
ATG4D-209ENST00000588857 CACHD1Q5VU97 1274 aa21.35■■□□□ 1.01
ATG4D-209ENST00000588857 ZNF425Q6IV72 752 aa21.35■■□□□ 1.01
ATG4D-209ENST00000588857 TRIM73Q86UV7 250 aa21.35■■□□□ 1.01
ATG4D-209ENST00000588857 TTLQ8NG68 377 aa21.35■■□□□ 1.01
ATG4D-209ENST00000588857 RSC1A1Q92681 617 aa21.35■■□□□ 1.01
ATG4D-209ENST00000588857 SERPINI1Q99574 410 aa21.35■■□□□ 1.01
ATG4D-209ENST00000588857 SDR39U1Q9NRG7 319 aaPredicted RBP21.35■■□□□ 1.01
ATG4D-209ENST00000588857 SEMA4GQ9NTN9 838 aa21.35■■□□□ 1.01
ATG4D-209ENST00000588857 KLHL20Q9Y2M5 609 aa21.35■■□□□ 1.01
ATG4D-209ENST00000588857 POLR3HQ9Y535 204 aaPredicted RBP21.35■■□□□ 1.01
ATG4D-209ENST00000588857 PCDHGA5Q9Y5G8 931 aa21.35■■□□□ 1.01
ATG4D-209ENST00000588857 HAT1O14929 419 aa21.34■■□□□ 1.01
ATG4D-209ENST00000588857 NUDT21O43809 227 aaKnown RBP21.34■■□□□ 1.01
ATG4D-209ENST00000588857 HNRNPCL1O60812 293 aaKnown RBP21.34■■□□□ 1.01
ATG4D-209ENST00000588857 PROS1P07225 676 aa21.34■■□□□ 1.01
ATG4D-209ENST00000588857 PTX3P26022 381 aaPredicted RBP21.34■■□□□ 1.01
ATG4D-209ENST00000588857 MAPK1P28482 360 aa21.34■■□□□ 1.01
ATG4D-209ENST00000588857 PRDX6P30041 224 aa21.34■■□□□ 1.01
ATG4D-209ENST00000588857 MPLP40238 635 aa21.34■■□□□ 1.01
ATG4D-209ENST00000588857 HNRNPH2P55795 449 aaKnown RBP21.34■■□□□ 1.01
ATG4D-209ENST00000588857 NME5P56597 212 aa21.34■■□□□ 1.01
ATG4D-209ENST00000588857 SPRED3Q2MJR0 410 aa21.34■■□□□ 1.01
ATG4D-209ENST00000588857 AGKQ53H12 422 aa21.34■■□□□ 1.01
ATG4D-209ENST00000588857 ZCCHC8Q6NZY4 707 aaKnown RBP21.34■■□□□ 1.01
ATG4D-209ENST00000588857 KANSL1Q7Z3B3 1105 aa21.34■■□□□ 1.01
ATG4D-209ENST00000588857 PAQR7Q86WK9 346 aa21.34■■□□□ 1.01
ATG4D-209ENST00000588857 PLD3Q8IV08 490 aa21.34■■□□□ 1.01
ATG4D-209ENST00000588857 SLC35F3Q8IY50 421 aa21.34■■□□□ 1.01
ATG4D-209ENST00000588857 ANKRD53Q8N9V6 530 aa21.34■■□□□ 1.01
ATG4D-209ENST00000588857 APIPQ96GX9 242 aa21.34■■□□□ 1.01
ATG4D-209ENST00000588857 METTL2AQ96IZ6 378 aaKnown RBP21.34■■□□□ 1.01
ATG4D-209ENST00000588857 PPT2Q9UMR5 302 aa21.34■■□□□ 1.01
ATG4D-209ENST00000588857 RNF215Q9Y6U7 377 aa21.34■■□□□ 1.01
ATG4D-209ENST00000588857 LOC100653049A0A140TA62 436 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 TNFSF14O43557 240 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 SH3BGRLO75368 114 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 KRT34O76011 436 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 TGFB1P01137 390 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 THRAP10827 490 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 MAGP20916 626 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 GPX3P22352 226 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 SCTRP47872 440 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 RASSF2P50749 326 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 EPHA4P54764 986 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 CYP4F2P78329 520 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 ACSM2AQ08AH3 577 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 KIAA0040Q15053 153 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 MAPRE2Q15555 327 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 CSRP2Q16527 193 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 PDCD4Q53EL6 469 aaKnown RBP21.33■■□□□ 1.01
ATG4D-209ENST00000588857 ACSM2BQ68CK6 577 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 RALGAPA1Q6GYQ0 2036 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 ZUFSPQ96AP4 578 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 BRINP2Q9C0B6 783 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 ASIC5Q9NY37 505 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 CCDC167Q9P0B6 97 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 ANKMY1Q9P2S6 941 aa21.33■■□□□ 1.01
ATG4D-209ENST00000588857 A0A0J9YY10 115 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 LCMT2O60294 686 aaKnown RBP21.32■■□□□ 1
ATG4D-209ENST00000588857 MYO1DO94832 1006 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 ETHE1O95571 254 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 G6PDP11413 515 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 COX4I1P13073 169 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 GLB1P16278 677 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 GSTM2P28161 218 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 CAPZBP47756 277 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 MRPL19P49406 292 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms