RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 OR1L3Q8NH93 324 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 KIAA1143Q96AT1 154 aaPredicted RBP13.27□□□□□ -0.29
TRAF4-215ENST00000584944 ZNF501Q96CX3 271 aaPredicted RBP13.27□□□□□ -0.29
TRAF4-215ENST00000584944 REPS1Q96D71 796 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 PTCD3Q96EY7 689 aaKnown RBP13.27□□□□□ -0.29
TRAF4-215ENST00000584944 MAGEB10Q96LZ2 347 aaPredicted RBP13.27□□□□□ -0.29
TRAF4-215ENST00000584944 FAM111AQ96PZ2 611 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 OR4K3Q96R72 315 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 ERVK-6Q9BXR3 956 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 IPPKQ9H8X2 491 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 VIPAS39Q9H9C1 493 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 MKS1Q9NXB0 559 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 NKIRAS1Q9NYS0 192 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 STK38LQ9Y2H1 464 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 PLLPQ9Y342 182 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 ACTL7BQ9Y614 415 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 TEX51A0A1B0GUA7 166 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 TRBC2A0A5B9 178 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 FEZF1A0PJY2 475 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 ANKDD1BA6NHY2 528 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 KLK8O60259 260 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 CTSVO60911 334 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 SIX3O95343 332 aaPredicted RBP13.26□□□□□ -0.29
TRAF4-215ENST00000584944 OTCP00480 354 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 PROCP04070 461 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 NTRK1P04629 796 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 VARSP26640 1264 aaKnown RBP13.26□□□□□ -0.29
TRAF4-215ENST00000584944 SKP1P63208 163 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 YBX1P67809 324 aaKnown RBP13.26□□□□□ -0.29
TRAF4-215ENST00000584944 CSNK1G2P78368 415 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 C19orf57Q0VDD7 668 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 HSP90B2PQ58FF3 399 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 ATG9BQ674R7 924 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 ZNF425Q6IV72 752 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 PWWP2BQ6NUJ5 590 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 C6orf15Q6UXA7 325 aaPredicted RBP13.26□□□□□ -0.29
TRAF4-215ENST00000584944 TMIGD1Q6UXZ0 262 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 RNF44Q7L0R7 432 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 GPR155Q7Z3F1 870 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 GOLGA7Q7Z5G4 137 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 KLHDC8AQ8IYD2 350 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 ESX1Q8N693 406 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 IL22RA1Q8N6P7 574 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 TRPV3Q8NET8 790 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 TCP10LQ8TDR4 215 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 PAIP2Q9BPZ3 127 aaKnown RBP13.26□□□□□ -0.29
TRAF4-215ENST00000584944 PITHD1Q9GZP4 211 aaPredicted RBP13.26□□□□□ -0.29
TRAF4-215ENST00000584944 TWSG1Q9GZX9 223 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 SPRTNQ9H040 489 aaPredicted RBP13.26□□□□□ -0.29
TRAF4-215ENST00000584944 EHD1Q9H4M9 534 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 NOL11Q9H8H0 719 aaKnown RBP13.26□□□□□ -0.29
TRAF4-215ENST00000584944 SEMA4BQ9NPR2 832 aaPredicted RBP13.26□□□□□ -0.29
TRAF4-215ENST00000584944 FOXJ2Q9P0K8 574 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 SH2B3Q9UQQ2 575 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 PCDHB3Q9Y5E6 796 aa13.26□□□□□ -0.29
TRAF4-215ENST00000584944 CFAP46Q8IYW2 2715 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 IGKV1-8A0A0C4DH67 115 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 A0A1W2PNU3 283 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-215ENST00000584944 HYKKA2RU49 373 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 URADA6NGE7 173 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 C9orf172C9J069 976 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 C9J4A7 227 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 H0YGG7 62 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 TM9SF1O15321 606 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 NDUFS4O43181 175 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 ZNF749O43361 778 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 DLX3O60479 287 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 ZWINTO95229 277 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 CLDN9O95484 217 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 MLYCDO95822 493 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 PCNAP12004 261 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 IMPDH1P20839 514 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 PRKAA2P54646 552 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 ARF3P61204 181 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-215ENST00000584944 MAGOHP61326 146 aaKnown RBP13.25□□□□□ -0.29
TRAF4-215ENST00000584944 NFKB2Q00653 900 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 GPS2Q13227 327 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 DOC2AQ14183 400 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 MUM1Q2TAK8 710 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 HHATQ5VTY9 493 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 YOD1Q5VVQ6 348 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-215ENST00000584944 FRMPD2BQ6IN97 320 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 MED27Q6P2C8 311 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 SLCO4C1Q6ZQN7 724 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 ASPGQ86U10 573 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 NLGN4XQ8N0W4 816 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 MFSD9Q8NBP5 474 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 ZNF248Q8NDW4 579 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 NLGN4YQ8NFZ3 816 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-215ENST00000584944 KCNE4Q8WWG9 221 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 SLC13A3Q8WWT9 602 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 MR1Q95460 341 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 RNF31Q96EP0 1072 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 CENPKQ9BS16 269 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 TMBIM4Q9HC24 238 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 SSU72Q9NP77 194 aaKnown RBP13.25□□□□□ -0.29
TRAF4-215ENST00000584944 ASCL3Q9NQ33 180 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 STARD5Q9NSY2 213 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 COPG2Q9UBF2 871 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 GPN3Q9UHW5 284 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms