RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 AMER2Q8N7J2 671 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 TTC29Q8NA56 475 aaPredicted RBP14.92□□□□□ -0.02
SKA2-209ENST00000583976 OR11G2Q8NGC1 345 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 UBLCP1Q8WVY7 318 aaPredicted RBP14.92□□□□□ -0.02
SKA2-209ENST00000583976 C10orf90Q96M02 699 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 FOPNLQ96NB1 174 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 CRB3Q9BUF7 120 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 PARD6BQ9BYG5 372 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 SLC26A1Q9H2B4 701 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 KLHL42Q9P2K6 505 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 FBN2P35556 2912 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 LOC105369274A0A096LPK9 316 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 LOC102723532A0A0G2JNH3 316 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 A0A0J9YVX5 310 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 VSTM2BA6NLU5 285 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 PRICKLE3O43900 615 aaPredicted RBP14.91□□□□□ -0.02
SKA2-209ENST00000583976 C1orf105O95561 183 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 ONECUT2O95948 504 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 ALBP02768 609 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 RPN2P04844 631 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 CD63P08962 238 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 ATP5DP30049 168 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 TSFMP43897 325 aaKnown RBP14.91□□□□□ -0.02
SKA2-209ENST00000583976 RGS4P49798 205 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 CDC16Q13042 620 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 BMPR2Q13873 1038 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 SLC29A2Q14542 456 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 ZNF169Q14929 603 aaPredicted RBP14.91□□□□□ -0.02
SKA2-209ENST00000583976 AGAP7PQ5VUJ5 663 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 WDR93Q6P2C0 686 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 TTC23LQ6PF05 361 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 TMEM207Q6UWW9 146 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 CYHR1Q6ZMK1 362 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 ZGRF1Q86YA3 2104 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 OR4N4Q8N0Y3 316 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 LINGO1Q96FE5 620 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 THOC3Q96J01 351 aaKnown RBP14.91□□□□□ -0.02
SKA2-209ENST00000583976 AGAP4Q96P64 663 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 FUT8Q9BYC5 575 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 ZNF160Q9HCG1 818 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 AGPAT4Q9NRZ5 378 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 INTS7Q9NVH2 962 aaKnown RBP14.91□□□□□ -0.02
SKA2-209ENST00000583976 OSGIN2Q9Y236 505 aa14.91□□□□□ -0.02
SKA2-209ENST00000583976 A0A1W2PPV9 198 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 FITM1A5D6W6 292 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 PHGDHO43175 533 aaKnown RBP14.9□□□□□ -0.02
SKA2-209ENST00000583976 KLHL41O60662 606 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 KLHL18O94889 574 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 MATN4O95460 622 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 CELA2AP08217 269 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 INHBAP08476 426 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 MPC1LP0DKB6 136 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 ENO3P13929 434 aaPredicted RBP14.9□□□□□ -0.02
SKA2-209ENST00000583976 MSH2P43246 934 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 IL2P60568 153 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 POU4F1Q01851 419 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 KLC1Q07866 573 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 FASTKQ14296 549 aaKnown RBP14.9□□□□□ -0.02
SKA2-209ENST00000583976 ZC3H12BQ5HYM0 836 aaKnown RBP14.9□□□□□ -0.02
SKA2-209ENST00000583976 WASHC2DQ5SRD0 308 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 MROH9Q5TGP6 573 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 C1QL3Q5VWW1 255 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 RNF44Q7L0R7 432 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 MYO1HQ8N1T3 1032 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 CATSPER1Q8NEC5 780 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 OR2L3Q8NG85 312 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 DNAJB14Q8TBM8 379 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 SLC44A1Q8WWI5 657 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.9□□□□□ -0.021e-8■■■■■ 101.1
SKA2-209ENST00000583976 SLC22A18Q96BI1 424 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 PAFAH2Q99487 392 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 GPR22Q99680 433 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 LHPPQ9H008 270 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 EPB41L4BQ9H329 900 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 EPS8L2Q9H6S3 715 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 GPAMQ9HCL2 828 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 NXT1Q9UKK6 140 aaKnown RBP14.9□□□□□ -0.02
SKA2-209ENST00000583976 IKBKGQ9Y6K9 419 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 CPAMD8Q8IZJ3 1885 aa14.9□□□□□ -0.02
SKA2-209ENST00000583976 EXOC1LA0A1B0GW35 172 aa14.89□□□□□ -0.03
SKA2-209ENST00000583976 HYKKA2RU49 373 aa14.89□□□□□ -0.03
SKA2-209ENST00000583976 LRRTM2O43300 516 aa14.89□□□□□ -0.03
SKA2-209ENST00000583976 ZG16O60844 167 aa14.89□□□□□ -0.03
SKA2-209ENST00000583976 SYF2O95926 243 aaKnown RBP14.89□□□□□ -0.03
SKA2-209ENST00000583976 EIF2S1P05198 315 aaKnown RBP14.89□□□□□ -0.03
SKA2-209ENST00000583976 ABHD2P08910 425 aa14.89□□□□□ -0.03
SKA2-209ENST00000583976 ACPPP15309 386 aa14.89□□□□□ -0.03
SKA2-209ENST00000583976 STMN1P16949 149 aa14.89□□□□□ -0.03
SKA2-209ENST00000583976 SRSF11Q05519 484 aaKnown RBP14.89□□□□□ -0.03
SKA2-209ENST00000583976 EEF1A2Q05639 463 aaKnown RBP14.89□□□□□ -0.03
SKA2-209ENST00000583976 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.89□□□□□ -0.03
SKA2-209ENST00000583976 TCTE1Q5JU00 501 aa14.89□□□□□ -0.03
SKA2-209ENST00000583976 IRAK1BP1Q5VVH5 260 aa14.89□□□□□ -0.03
SKA2-209ENST00000583976 NEK10Q6ZWH5 1172 aa14.89□□□□□ -0.03
SKA2-209ENST00000583976 UBE2R2Q712K3 238 aaPredicted RBP14.89□□□□□ -0.03
SKA2-209ENST00000583976 CMC1Q7Z7K0 106 aa14.89□□□□□ -0.03
SKA2-209ENST00000583976 SPATA6LQ8N4H0 392 aa14.89□□□□□ -0.03
SKA2-209ENST00000583976 STT3BQ8TCJ2 826 aa14.89□□□□□ -0.03
SKA2-209ENST00000583976 TSPAN17Q96FV3 270 aa14.89□□□□□ -0.03
SKA2-209ENST00000583976 ACAT2Q9BWD1 397 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms