RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 ACRV1P26436 265 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 PEX19P40855 299 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 XCR1P46094 333 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 RHAGQ02094 409 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 PLGLB1Q02325 96 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 DBN1Q16643 649 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 CCDC38Q502W7 563 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 KIAA0408Q6ZU52 694 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 CYP4Z2PQ8N1L4 340 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 TMEM251Q8N6I4 163 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 OR2A1Q8NGT9 310 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 CREB3L4Q8TEY5 395 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 SREK1Q8WXA9 508 aaKnown RBP10.29□□□□□ -0.76
GGA3-206ENST00000578773 RAPGEF5Q92565 580 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 PIGTQ969N2 578 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 ZUFSPQ96AP4 578 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 OLFM3Q96PB7 478 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 MACROD1Q9BQ69 325 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 ACAT2Q9BWD1 397 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 TTTY12Q9BZ98 90 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 DRC3Q9H069 523 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 KCMF1Q9P0J7 381 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 C19orf25Q9UFG5 118 aaPredicted RBP10.29□□□□□ -0.76
GGA3-206ENST00000578773 RUVBL2Q9Y230 463 aaKnown RBP10.29□□□□□ -0.76
GGA3-206ENST00000578773 WIF1Q9Y5W5 379 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 NOTCH1P46531 2555 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 PRR14LQ5THK1 2151 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 TRBV5-4A0A0C4DH59 114 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 CFAP99D6REC4 459 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 PRPF4O43172 522 aaKnown RBP eCLIP10.28□□□□□ -0.76
GGA3-206ENST00000578773 CD5LO43866 347 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 WDR1O75083 606 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 GLSO94925 669 aaPredicted RBP10.28□□□□□ -0.76
GGA3-206ENST00000578773 FAM157CP0CG43 387 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 MC4RP32245 332 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 BDKRB1P46663 353 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 ZNF140P52738 457 aaPredicted RBP10.28□□□□□ -0.76
GGA3-206ENST00000578773 TAS2R50P59544 299 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 WASHC5Q12768 1159 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 MSLNQ13421 630 aaPredicted RBP10.28□□□□□ -0.76
GGA3-206ENST00000578773 ABRAXAS2Q15018 415 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 ACKR1Q16570 336 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 TEX44Q53QW1 395 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 KIAA0930Q6ICG6 404 aaPredicted RBP10.28□□□□□ -0.76
GGA3-206ENST00000578773 ZNF449Q6P9G9 518 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 ZNF571Q7Z3V5 609 aaPredicted RBP10.28□□□□□ -0.76
GGA3-206ENST00000578773 SNX20Q7Z614 316 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 PLD3Q8IV08 490 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 NIPA2Q8N8Q9 360 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 KCTD6Q8NC69 237 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 OR2M7Q8NG81 312 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 OR51Q1Q8NH59 317 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 ROBO4Q8WZ75 1007 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 ULK4Q96C45 1275 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 MVB12AQ96EY5 273 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 TEKT5Q96M29 485 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 HS3ST6Q96QI5 342 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 WDR83Q9BRX9 315 aaKnown RBP10.28□□□□□ -0.76
GGA3-206ENST00000578773 DPH7Q9BTV6 452 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 GSX2Q9BZM3 304 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 EPB41L4BQ9H329 900 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 ACAD8Q9UKU7 415 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 DRG1Q9Y295 367 aaKnown RBP10.28□□□□□ -0.76
GGA3-206ENST00000578773 KLK4Q9Y5K2 254 aa10.28□□□□□ -0.76
GGA3-206ENST00000578773 A0A1B0GVC2 190 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 SH3D21A4FU49 640 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 OR14I1A6ND48 311 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 SGK494L7N484 410 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 QSOX1O00391 747 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 AQP7O14520 342 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 DVL2O14641 736 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 IL1RNP18510 177 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 ITGALP20701 1170 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 CDK11BP21127 795 aaKnown RBP10.27□□□□□ -0.77
GGA3-206ENST00000578773 ACTN3Q08043 901 aaPredicted RBP10.27□□□□□ -0.77
GGA3-206ENST00000578773 KRT31Q15323 416 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 TAF1AQ15573 450 aaPredicted RBP10.27□□□□□ -0.77
GGA3-206ENST00000578773 DPCR1Q3MIW9 517 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 SYTL3Q4VX76 610 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 HSCBQ8IWL3 235 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 IGFBPL1Q8WX77 278 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 SMPDL3BQ92485 455 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 SLC22A18Q96BI1 424 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 DNAJC1Q96KC8 554 aaKnown RBP10.27□□□□□ -0.77
GGA3-206ENST00000578773 RNF157Q96PX1 679 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 LPAR4Q99677 370 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 SGPP1Q9BX95 441 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 VPS37BQ9H9H4 285 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 LIN28AQ9H9Z2 209 aaKnown RBP10.27□□□□□ -0.77
GGA3-206ENST00000578773 SEMA4BQ9NPR2 832 aaPredicted RBP10.27□□□□□ -0.77
GGA3-206ENST00000578773 RTN4Q9NQC3 1192 aaKnown RBP10.27□□□□□ -0.77
GGA3-206ENST00000578773 LANCL2Q9NS86 450 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 SMARCAL1Q9NZC9 954 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 ANAPC7Q9UJX3 599 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 SCINQ9Y6U3 715 aa10.27□□□□□ -0.77
GGA3-206ENST00000578773 FREM1Q5H8C1 2179 aa10.26□□□□□ -0.77
GGA3-206ENST00000578773 ATP6AP2A0A1C7CYW4 349 aa10.26□□□□□ -0.77
GGA3-206ENST00000578773 OR51F1A6NGY5 319 aa10.26□□□□□ -0.77
GGA3-206ENST00000578773 HSPB2A8KAH6 182 aa10.26□□□□□ -0.77
GGA3-206ENST00000578773 DEFB108AA8MXU0 73 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms