RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 MKL2Q9ULH7 1088 aa12.06□□□□□ -0.48
NPLOC4-213ENST00000573519 NSG1A0A0A6YYJ2 146 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 NPEPPSL1A6NEC2 478 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 SERPIND1P05546 499 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 ENO2P09104 434 aaPredicted RBP12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 NPPBP16860 134 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 IL1RNP18510 177 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 SSTR1P30872 391 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 BCL6P41182 706 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 GLRBP48167 497 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 SLC12A2P55011 1212 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 SNRPNP63162 240 aaKnown RBP12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 Q0VFX4 171 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 FAM53BQ14153 422 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 ZDHHC24Q6UX98 284 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 IGFL3Q6UXB1 125 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 LINC00696Q6ZRV3 163 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 PRSS41Q7RTY9 318 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 VN1R4Q7Z5H5 301 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 ASPGQ86U10 573 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 SLC26A11Q86WA9 606 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 ZC3HC1Q86WB0 502 aaKnown RBP12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 CCDC25Q86WR0 208 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 KBTBD2Q8IY47 623 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 FAM26EQ8N5C1 309 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 CISD2Q8N5K1 135 aaKnown RBP12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 CAMKVQ8NCB2 501 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 GALNT11Q8NCW6 608 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 FBXO25Q8TCJ0 367 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 SLC13A3Q8WWT9 602 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 ATL1Q8WXF7 558 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 THAP11Q96EK4 314 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 C19orf60Q96EN9 201 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 CNDP1Q96KN2 507 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 TSNARE1Q96NA8 513 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 LRRC1Q9BTT6 524 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 SGPP1Q9BX95 441 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 SLC29A3Q9BZD2 475 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 RAB17Q9H0T7 212 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 EPS8L2Q9H6S3 715 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 ANKHQ9HCJ1 492 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 SMYD2Q9NRG4 433 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 NSMCE4AQ9NXX6 385 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 HCN3Q9P1Z3 774 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 IKZF3Q9UKT9 509 aa12.05□□□□□ -0.48
NPLOC4-213ENST00000573519 KCNE1BA0A087WTH5 132 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 CXorf49A8MYA2 514 aaPredicted RBP12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 SGK494L7N484 410 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 CDC7O00311 574 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 NDUFS4O43181 175 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 OR1F1O43749 312 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 LCMT2O60294 686 aaKnown RBP12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 SLC35G6P0C7Q6 338 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 COX6A1P12074 109 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 ZNF37AP17032 561 aaPredicted RBP12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 VARSP26640 1264 aaKnown RBP12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 CCR8P51685 355 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 CBLBQ13191 982 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 CSHL1Q14406 222 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 WHAMMP3Q1A5X7 153 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 MINDY4Q4G0A6 757 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 ATG9BQ674R7 924 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 C8orf74Q6P047 294 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 SBSNQ6UWP8 590 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 TMEM207Q6UWW9 146 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 FRA10AC1Q70Z53 315 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 NDUFAF7Q7L592 441 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 ZC3H7AQ8IWR0 971 aaKnown RBP12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 ARHGEF39Q8N4T4 335 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 NKAPQ8N5F7 415 aaKnown RBP12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 TBC1D19Q8N5T2 526 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 KCT2Q8NC54 265 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 OR56A3Q8NH54 315 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 DNAJB14Q8TBM8 379 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 FBXL8Q96CD0 374 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 SNRNP40Q96DI7 357 aaKnown RBP12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 VPS39Q96JC1 886 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 EGFL8Q99944 293 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 WDR77Q9BQA1 342 aaPredicted RBP12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 TGIF2Q9GZN2 237 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 GPAMQ9HCL2 828 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 TXNDC16Q9P2K2 825 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 DYRK1BQ9Y463 629 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 CSAG2Q9Y5P2 127 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 ASH1LQ9NR48 2969 aaKnown RBP12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 CCDC88CQ9P219 2028 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 NUP210LQ5VU65 1888 aa12.04□□□□□ -0.48
NPLOC4-213ENST00000573519 IGHV1-45A0A0A0MS14 117 aa12.03□□□□□ -0.48
NPLOC4-213ENST00000573519 TCP11X1B4DZS4 312 aa12.03□□□□□ -0.48
NPLOC4-213ENST00000573519 H0YIG0 161 aa12.03□□□□□ -0.48
NPLOC4-213ENST00000573519 EIF3HO15372 352 aaKnown RBP eCLIP12.03□□□□□ -0.48
NPLOC4-213ENST00000573519 JRKO75564 520 aa12.03□□□□□ -0.48
NPLOC4-213ENST00000573519 NSA2O95478 260 aaKnown RBP12.03□□□□□ -0.48
NPLOC4-213ENST00000573519 C8orf89P0DMQ9 161 aa12.03□□□□□ -0.48
NPLOC4-213ENST00000573519 XCR1P46094 333 aa12.03□□□□□ -0.48
NPLOC4-213ENST00000573519 TAS2R39P59534 338 aa12.03□□□□□ -0.48
NPLOC4-213ENST00000573519 GPX6P59796 221 aa12.03□□□□□ -0.48
NPLOC4-213ENST00000573519 SRSF1Q07955 248 aaKnown RBP eCLIP12.03□□□□□ -0.48
NPLOC4-213ENST00000573519 MRPL49Q13405 166 aaKnown RBP12.03□□□□□ -0.48
NPLOC4-213ENST00000573519 ZXDCQ2QGD7 858 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms