RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 WDR74Q6RFH5 385 aaPredicted RBP6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 TMIGD1Q6UXZ0 262 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 SLCO4C1Q6ZQN7 724 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 ACAD11Q709F0 780 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 ASCL5Q7RTU5 278 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 PRSS42Q7Z5A4 293 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 FAM129CQ86XR2 697 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 KMT5CQ86Y97 462 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 KIAA2013Q8IYS2 634 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 LRRC34Q8IZ02 419 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 CLYBLQ8N0X4 340 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 L3MBTL4Q8NA19 623 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 TWIST2Q8WVJ9 160 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 SELENOMQ8WWX9 145 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 MOCOSQ96EN8 888 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 C19orf60Q96EN9 201 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 TCTN2Q96GX1 697 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 PRAP1Q96NZ9 151 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 FRG2BQ96QU4 278 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 KCNA7Q96RP8 456 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 SORT1Q99523 831 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 NRTNQ99748 197 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 CCT7Q99832 543 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZFYVE21Q9BQ24 234 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 RAB33BQ9H082 229 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 KLHL25Q9H0H3 589 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 SEMA6CQ9H3T2 930 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 PDE7BQ9NP56 450 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 SLC6A20Q9NP91 592 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 TIMMDC1Q9NPL8 285 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 C1GALT1Q9NS00 363 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 TMEM184CQ9NVA4 438 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 GEMIN8Q9NWZ8 242 aaKnown RBP6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 ADGRE2Q9UHX3 823 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 SH2B3Q9UQQ2 575 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 BTRCQ9Y297 605 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 RNF11Q9Y3C5 154 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 TRAF6Q9Y4K3 522 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 U3KQA8 63 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 CACNA1IQ9P0X4 2223 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 A0A088AWK7 358 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 A0A0J9YVX5 310 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 FEZF1A0PJY2 475 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 URADA6NGE7 173 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 SRRM3A6NNA2 597 aaPredicted RBP6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 A8MU76 341 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 H0YIV9 168 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 SLC28A1O00337 649 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 MANBAO00462 879 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 PPP6CO00743 305 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 NDUFAB1O14561 156 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 UBFD1O14562 309 aaKnown RBP6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 PIP5K1BO14986 540 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 TOX3O15405 576 aaPredicted RBP6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 NDUFS4O43181 175 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 RGS14O43566 566 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 SHOX2O60902 331 aaPredicted RBP6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 CDK4P11802 303 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 HSD3B1P14060 373 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 PVRP15151 417 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 ST6GAL1P15907 406 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 EPORP19235 508 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZNF10P21506 573 aaPredicted RBP6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 HSD3B2P26439 372 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 CD1CP29017 333 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 GRIA3P42263 894 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 LIMK1P53667 647 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 AQP5P55064 265 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 ERVPABLB-1P60509 514 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 SKP1P63208 163 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 CSNK1G2P78368 415 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 CCL7P80098 99 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 HSD11B2P80365 405 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 E2F1Q01094 437 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZNF33BQ06732 778 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 TGM3Q08188 693 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 CSTF3Q12996 717 aaKnown RBP6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 TRIP6Q15654 476 aaKnown RBP6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZXDCQ2QGD7 858 aaPredicted RBP6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 DEFB110Q30KQ9 67 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 ATP6AP1LQ52LC2 224 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 KIAA1614Q5VZ46 1190 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 NXNQ6DKJ4 435 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 TMEM71Q6P5X7 295 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 FIGLAQ6QHK4 219 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 DBX2Q6ZNG2 339 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 RBM44Q6ZP01 1051 aaKnown RBP6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 USP53Q70EK8 1073 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 RNF44Q7L0R7 432 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 SPATA21Q7Z572 469 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 FAM20CQ8IXL6 584 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 ALDH16A1Q8IZ83 802 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 LSMEM2Q8N112 164 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 GBP7Q8N8V2 638 aaPredicted RBP6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 TTC29Q8NA56 475 aaPredicted RBP6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 DEFB124Q8NES8 71 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 ABHD11Q8NFV4 315 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 OR4D9Q8NGE8 314 aa6.31□□□□□ -1.4
CTDNEP1-204ENST00000570484 OR6Y1Q8NGX8 325 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms