RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 FOXS1O43638 330 aa12.45□□□□□ -0.42
SPG7-221ENST00000569720 JRKO75564 520 aa12.45□□□□□ -0.42
SPG7-221ENST00000569720 HRH2P25021 359 aa12.45□□□□□ -0.42
SPG7-221ENST00000569720 TNFSF10P50591 281 aa12.45□□□□□ -0.42
SPG7-221ENST00000569720 CTBP1Q13363 440 aa12.45□□□□□ -0.42
SPG7-221ENST00000569720 CUL1Q13616 776 aa12.45□□□□□ -0.42
SPG7-221ENST00000569720 TTC27Q6P3X3 843 aa12.45□□□□□ -0.42
SPG7-221ENST00000569720 KLHL7Q8IXQ5 586 aa12.45□□□□□ -0.42
SPG7-221ENST00000569720 MCUQ8NE86 351 aa12.45□□□□□ -0.42
SPG7-221ENST00000569720 PSMF1Q92530 271 aa12.45□□□□□ -0.42
SPG7-221ENST00000569720 SLC30A3Q99726 388 aa12.45□□□□□ -0.42
SPG7-221ENST00000569720 ERP44Q9BS26 406 aa12.45□□□□□ -0.42
SPG7-221ENST00000569720 TUBB6Q9BUF5 446 aa12.45□□□□□ -0.42
SPG7-221ENST00000569720 ZNF700Q9H0M5 742 aa12.45□□□□□ -0.42
SPG7-221ENST00000569720 CCDC177Q9NQR7 707 aaPredicted RBP12.45□□□□□ -0.42
SPG7-221ENST00000569720 TMEM184CQ9NVA4 438 aa12.45□□□□□ -0.42
SPG7-221ENST00000569720 PLA2G3Q9NZ20 509 aa12.45□□□□□ -0.42
SPG7-221ENST00000569720 TEKT2Q9UIF3 430 aa12.45□□□□□ -0.42
SPG7-221ENST00000569720 DHRS7Q9Y394 339 aa12.45□□□□□ -0.42
SPG7-221ENST00000569720 SCN3AQ9NY46 2000 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 LOC102723996A0A087X1L8 192 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 H0YIG0 161 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 H7BY64 318 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 GFYI3L273 518 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 EIF3FO00303 357 aaPredicted RBP12.44□□□□□ -0.42
SPG7-221ENST00000569720 STSP08842 583 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 C8orf89P0DMQ9 161 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 SKIV2L2P42285 1042 aaKnown RBP12.44□□□□□ -0.42
SPG7-221ENST00000569720 RPS15AP62244 130 aaKnown RBP12.44□□□□□ -0.42
SPG7-221ENST00000569720 CBLBQ13191 982 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 ZRSR2Q15696 482 aaKnown RBP12.44□□□□□ -0.42
SPG7-221ENST00000569720 LONRF1Q17RB8 773 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 SYT16Q17RD7 645 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 MFSD4BQ5TF39 518 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 ABHD17BQ5VST6 288 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 ANKRD22Q5VYY1 191 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 LRRC8EQ6NSJ5 796 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 UGT3A1Q6NUS8 523 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 TMEM205Q6UW68 189 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 UBE2R2Q712K3 238 aaPredicted RBP12.44□□□□□ -0.42
SPG7-221ENST00000569720 DENND6AQ8IWF6 608 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 ZC3H7AQ8IWR0 971 aaKnown RBP12.44□□□□□ -0.42
SPG7-221ENST00000569720 PALM2Q8IXS6 379 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 GIMAP7Q8NHV1 300 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 GABPB2Q8TAK5 448 aaPredicted RBP12.44□□□□□ -0.42
SPG7-221ENST00000569720 NR4A3Q92570 626 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 PRAP1Q96NZ9 151 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 GPR21Q99679 349 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 RNF32Q9H0A6 362 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 PCBD2Q9H0N5 130 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 C20orf96Q9NUD7 363 aaPredicted RBP12.44□□□□□ -0.42
SPG7-221ENST00000569720 WHRNQ9P202 907 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 C19orf25Q9UFG5 118 aaPredicted RBP12.44□□□□□ -0.42
SPG7-221ENST00000569720 LRBAP50851 2863 aa12.44□□□□□ -0.42
SPG7-221ENST00000569720 MYO7BQ6PIF6 2116 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 ZCWPW2A0A1B0GU75 182 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 GOLGA8MH3BSY2 632 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 P2RX6O15547 441 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 ZG16O60844 167 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 NSA2O95478 260 aaKnown RBP12.43□□□□□ -0.42
SPG7-221ENST00000569720 CRYABP02511 175 aaKnown RBP12.43□□□□□ -0.42
SPG7-221ENST00000569720 CYC1P08574 325 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 ITGAMP11215 1152 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 IMPA1P29218 277 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 SLC1A2P43004 574 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 RGS4P49798 205 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 MAT1AQ00266 395 aaKnown RBP12.43□□□□□ -0.42
SPG7-221ENST00000569720 C2orf54Q08AI8 447 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 CALCOCO2Q13137 446 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 PCOLCEQ15113 449 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 KCTD19Q17RG1 926 aaPredicted RBP12.43□□□□□ -0.42
SPG7-221ENST00000569720 HIBCHQ6NVY1 386 aaPredicted RBP12.43□□□□□ -0.42
SPG7-221ENST00000569720 ZNF549Q6P9A3 640 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 CYHR1Q6ZMK1 362 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 FJX1Q86VR8 437 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 PLD3Q8IV08 490 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 IFT20Q8IY31 132 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 LRRC56Q8IYG6 542 aaPredicted RBP12.43□□□□□ -0.42
SPG7-221ENST00000569720 CPNE9Q8IYJ1 553 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 ARHGEF39Q8N4T4 335 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 DNAJB8Q8NHS0 232 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 CD200R1Q8TD46 325 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 THAP11Q96EK4 314 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 SNF8Q96H20 258 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 SERPINB12Q96P63 405 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 FAM167BQ9BTA0 163 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 PHACTR1Q9C0D0 580 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 SYNPO2LQ9H987 977 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 TRMT6Q9UJA5 497 aaKnown RBP12.43□□□□□ -0.42
SPG7-221ENST00000569720 MED16Q9Y2X0 877 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 MAD1L1Q9Y6D9 718 aa12.43□□□□□ -0.42
SPG7-221ENST00000569720 KCNE1BA0A087WTH5 132 aa12.42□□□□□ -0.42
SPG7-221ENST00000569720 OR5H15A6NDH6 313 aa12.42□□□□□ -0.42
SPG7-221ENST00000569720 TTI1O43156 1089 aa12.42□□□□□ -0.42
SPG7-221ENST00000569720 HNRNPRO43390 633 aaKnown RBP12.42□□□□□ -0.42
SPG7-221ENST00000569720 RAD51CO43502 376 aa12.42□□□□□ -0.42
SPG7-221ENST00000569720 RASAL1O95294 804 aa12.42□□□□□ -0.42
SPG7-221ENST00000569720 WDPCPO95876 746 aa12.42□□□□□ -0.42
SPG7-221ENST00000569720 F10P00742 488 aa12.42□□□□□ -0.42
SPG7-221ENST00000569720 CELA2AP08217 269 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms