RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ASB11Q8WXH4 323 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 MAGED4Q96JG8 741 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 ZNF354BQ96LW1 612 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 CYTH2Q99418 400 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 MACROD1Q9BQ69 325 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 KCNK13Q9HB14 408 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 ANKHQ9HCJ1 492 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 CHST11Q9NPF2 352 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 CCDC177Q9NQR7 707 aaPredicted RBP12.28□□□□□ -0.44
SF3B3-202ENST00000562722 ANKRD10Q9NXR5 420 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 ZGRF1Q86YA3 2104 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 ABCA12Q86UK0 2595 aa12.27□□□□□ -0.44
SF3B3-202ENST00000562722 SGK494L7N484 410 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 TTI1O43156 1089 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 CEP104O60308 925 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 SLC19A2O60779 497 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 NSA2O95478 260 aaKnown RBP12.27□□□□□ -0.45
SF3B3-202ENST00000562722 MLYCDO95822 493 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 MPC1LP0DKB6 136 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 ENO3P13929 434 aaPredicted RBP12.27□□□□□ -0.45
SF3B3-202ENST00000562722 IMPA1P29218 277 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 EFNA3P52797 238 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 RPS15AP62244 130 aaKnown RBP12.27□□□□□ -0.45
SF3B3-202ENST00000562722 CTBP1Q13363 440 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 ZXDCQ2QGD7 858 aaPredicted RBP12.27□□□□□ -0.45
SF3B3-202ENST00000562722 ACER2Q5QJU3 275 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 PRSS41Q7RTY9 318 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 PIWIL4Q7Z3Z4 852 aaKnown RBP12.27□□□□□ -0.45
SF3B3-202ENST00000562722 SPNS2Q8IVW8 549 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 DENND6AQ8IWF6 608 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 CPNE9Q8IYJ1 553 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 FBXO15Q8NCQ5 510 aaPredicted RBP12.27□□□□□ -0.45
SF3B3-202ENST00000562722 OR51Q1Q8NH59 317 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 KCNJ9Q92806 393 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 ALKBH8Q96BT7 664 aaKnown RBP12.27□□□□□ -0.45
SF3B3-202ENST00000562722 UTP23Q9BRU9 249 aaKnown RBP12.27□□□□□ -0.45
SF3B3-202ENST00000562722 RBCK1Q9BYM8 510 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 LZTFL1Q9NQ48 299 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 KLHL1Q9NR64 748 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 HOMER3Q9NSC5 361 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 TMEM184CQ9NVA4 438 aa12.27□□□□□ -0.45
SF3B3-202ENST00000562722 OR2W5A6NFC9 320 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 GOLGA8MH3BSY2 632 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 KIF5CO60282 957 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 RDH16O75452 317 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 CDC123O75794 336 aaPredicted RBP12.26□□□□□ -0.45
SF3B3-202ENST00000562722 HRH2P25021 359 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 EEF1DP29692 281 aaKnown RBP12.26□□□□□ -0.45
SF3B3-202ENST00000562722 PTGER4P35408 488 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 GRK3P35626 688 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 BCL6P41182 706 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 SLC1A2P43004 574 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 AGTR2P50052 363 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 ST13P50502 369 aaKnown RBP12.26□□□□□ -0.45
SF3B3-202ENST00000562722 SMSP52788 366 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 TBPL1P62380 186 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 SNRPNP63162 240 aaKnown RBP12.26□□□□□ -0.45
SF3B3-202ENST00000562722 OC90Q02509 493 aaPredicted RBP12.26□□□□□ -0.45
SF3B3-202ENST00000562722 ACTN3Q08043 901 aaPredicted RBP12.26□□□□□ -0.45
SF3B3-202ENST00000562722 OR1C1Q15619 314 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 EXT1Q16394 746 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 MEP1AQ16819 746 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 ZNF630Q2M218 657 aaPredicted RBP12.26□□□□□ -0.45
SF3B3-202ENST00000562722 ANKRD22Q5VYY1 191 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 PLAG1Q6DJT9 500 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 VN1R4Q7Z5H5 301 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 ANKRD37Q7Z713 158 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 CAMKVQ8NCB2 501 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 GPR21Q99679 349 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 TSPAN10Q9H1Z9 355 aaPredicted RBP12.26□□□□□ -0.45
SF3B3-202ENST00000562722 C20orf96Q9NUD7 363 aaPredicted RBP12.26□□□□□ -0.45
SF3B3-202ENST00000562722 KLHL42Q9P2K6 505 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 TINAGQ9UJW2 476 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 MAD1L1Q9Y6D9 718 aa12.26□□□□□ -0.45
SF3B3-202ENST00000562722 LRBAP50851 2863 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 FAM237BA0A1B0GVD1 139 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 FEZF1A0PJY2 475 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 MAGEB16A2A368 324 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 SDR42E2A6NKP2 422 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 NPIPA5E9PKD4 350 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 GFYI3L273 518 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 KRT14P02533 472 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 CYC1P08574 325 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 CD46P15529 392 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 CDC25BP30305 580 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 CXCR5P32302 372 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 COILP38432 576 aaPredicted RBP12.25□□□□□ -0.45
SF3B3-202ENST00000562722 SKIV2L2P42285 1042 aaKnown RBP12.25□□□□□ -0.45
SF3B3-202ENST00000562722 ALDH6A1Q02252 535 aaKnown RBP12.25□□□□□ -0.45
SF3B3-202ENST00000562722 TUBA3CQ13748 450 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 ABRAXAS2Q15018 415 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 NSDHLQ15738 373 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 C3AR1Q16581 482 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 SFT2D3Q587I9 215 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 ARMC3Q5W041 872 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 TMEM214Q6NUQ4 689 aaKnown RBP12.25□□□□□ -0.45
SF3B3-202ENST00000562722 ZNF549Q6P9A3 640 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 TUBA3EQ6PEY2 450 aa12.25□□□□□ -0.45
SF3B3-202ENST00000562722 PAPD4Q6PIY7 484 aaKnown RBP12.25□□□□□ -0.45
SF3B3-202ENST00000562722 XKRXQ6PP77 449 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms