RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 PDZD2O15018 2839 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 AKAP9Q99996 3911 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 KCNE1BA0A087WTH5 132 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 GOLGA6L6A8MZA4 724 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 PRSS44E7EML9 344 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 PRAMEF2O60811 474 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 UNC5CO95185 931 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 RASAL1O95294 804 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 MAGEA3P43357 314 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 RPS15AP62244 130 aaKnown RBP15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 AP2B1P63010 937 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 ZNF33BQ06732 778 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 ABHD17BQ5VST6 288 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 TMEM214Q6NUQ4 689 aaKnown RBP15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 CPEB2Q7Z5Q1 589 aaKnown RBP15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 MCUQ8NE86 351 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 ITLN2Q8WWU7 325 aaPredicted RBP15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 METTL21AQ8WXB1 218 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 CYTH2Q99418 400 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 UNKQ9C0B0 810 aaKnown RBP15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 XAB2Q9HCS7 855 aaKnown RBP15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 CCDC177Q9NQR7 707 aaPredicted RBP15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 C20orf96Q9NUD7 363 aaPredicted RBP15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 TMEM184CQ9NVA4 438 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 STMN3Q9NZ72 180 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 HCN3Q9P1Z3 774 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 ADAMTS6Q9UKP5 1117 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 NEU2Q9Y3R4 380 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 CREBBPQ92793 2442 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 SVILO95425 2214 aa15.78■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 TACC2O95359 2948 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 SGK494L7N484 410 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 WISP2O76076 250 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 HAUS5O94927 633 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 IL1RNP18510 177 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 GRNP28799 593 aaKnown RBP15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 CSNK1G2P78368 415 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 TIAL1Q01085 375 aaKnown RBP eCLIP15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 PMP22Q01453 160 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 LONRF1Q17RB8 773 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 MINDY4Q4G0A6 757 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 MFSD4BQ5TF39 518 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 FCRLBQ6BAA4 426 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 PLAG1Q6DJT9 500 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 TMEM207Q6UWW9 146 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 MBOAT1Q6ZNC8 495 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 PDSS2Q86YH6 399 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 OR51Q1Q8NH59 317 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 DNAJB8Q8NHS0 232 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 TM4SF19Q96DZ7 209 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 CCDC120Q96HB5 630 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 AARSD1Q9BTE6 412 aaKnown RBP15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 SEC14L3Q9UDX4 400 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 FBXO5Q9UKT4 447 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 COMMD10Q9Y6G5 202 aa15.77■□□□□ 0.12
VPS9D1-AS1-201ENST00000562298 ADGRG4Q8IZF6 3080 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 TRGV8A0A0C4DH27 118 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 FEZF1A0PJY2 475 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 A8MUI8 341 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 EIF3FO00303 357 aaPredicted RBP15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CRYABP02511 175 aaKnown RBP15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CYC1P08574 325 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 HRH2P25021 359 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 COILP38432 576 aaPredicted RBP15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 BCL6P41182 706 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 XCR1P46094 333 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 PTK6Q13882 451 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 BTBD16Q32M84 506 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 HSP90AA5PQ58FG0 334 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 H3F3CQ6NXT2 135 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 ANKRD37Q7Z713 158 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 LMNTD2Q8IXW0 634 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 BEST3Q8N1M1 668 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 RASGEF1CQ8N431 466 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 KCT2Q8NC54 265 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 SUN3Q8TAQ9 357 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 ZCCHC10Q8TBK6 192 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 MAGOHBQ96A72 148 aaKnown RBP15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 MS4A14Q96JA4 679 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 SIGLEC10Q96LC7 697 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CCDC138Q96M89 665 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 NDNQ99608 321 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 NPAS2Q99743 824 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 TEKT2Q9UIF3 430 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 PDE10AQ9Y233 779 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 MAD1L1Q9Y6D9 718 aa15.76■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CELSR1Q9NYQ6 3014 aa15.75■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 LCMT2O60294 686 aaKnown RBP15.75■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CA7P43166 264 aa15.75■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 ST13P50502 369 aaKnown RBP15.75■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 ART3Q13508 389 aa15.75■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 ZNF766Q5HY98 468 aa15.75■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 ACER2Q5QJU3 275 aa15.75■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 NAT8LQ8N9F0 302 aa15.75■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CALML6Q8TD86 181 aa15.75■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 MCOLN3Q8TDD5 553 aa15.75■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 EEF1AKMT1Q8WVE0 214 aa15.75■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 THAP11Q96EK4 314 aa15.75■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 SIGLEC12Q96PQ1 595 aa15.75■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 ATG10Q9H0Y0 220 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms