RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 TSPAN17Q96FV3 270 aa11.97□□□□□ -0.49
LRRC28-214ENST00000559433 RBBP8Q99708 897 aa11.97□□□□□ -0.49
LRRC28-214ENST00000559433 CAB39LQ9H9S4 337 aa11.97□□□□□ -0.49
LRRC28-214ENST00000559433 TRPC4Q9UBN4 977 aa11.97□□□□□ -0.49
LRRC28-214ENST00000559433 CTNNAL1Q9UBT7 734 aa11.97□□□□□ -0.49
LRRC28-214ENST00000559433 VPS4AQ9UN37 437 aa11.97□□□□□ -0.49
LRRC28-214ENST00000559433 MTO1Q9Y2Z2 717 aaKnown RBP11.97□□□□□ -0.49
LRRC28-214ENST00000559433 HS3ST3B1Q9Y662 390 aa11.97□□□□□ -0.49
LRRC28-214ENST00000559433 PRRC2CQ9Y520 2896 aaKnown RBP11.97□□□□□ -0.49
LRRC28-214ENST00000559433 SPENQ96T58 3664 aaKnown RBP11.97□□□□□ -0.49
LRRC28-214ENST00000559433 SOCS6O14544 535 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 ALOX12BO75342 701 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 ITGA3P26006 1051 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 VARSP26640 1264 aaKnown RBP11.96□□□□□ -0.49
LRRC28-214ENST00000559433 STX2P32856 288 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 GP5P40197 560 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 SLC26A3P40879 764 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 AVPR1BP47901 424 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 CCR8P51685 355 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 MLLT10P55197 1068 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 FOXK1P85037 733 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 MEF2AQ02078 507 aaPredicted RBP11.96□□□□□ -0.49
LRRC28-214ENST00000559433 AIMP2Q13155 320 aaKnown RBP11.96□□□□□ -0.49
LRRC28-214ENST00000559433 FAM53BQ14153 422 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 USP10Q14694 798 aaKnown RBP11.96□□□□□ -0.49
LRRC28-214ENST00000559433 TSNQ15631 228 aaKnown RBP11.96□□□□□ -0.49
LRRC28-214ENST00000559433 TUBB8Q3ZCM7 444 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 NADK2Q4G0N4 442 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 VWA2Q5GFL6 755 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 VWA5B1Q5TIE3 1220 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 CYS1Q717R9 158 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 ADAMTSL2Q86TH1 951 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 ASPGQ86U10 573 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 AMER3Q8N944 861 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 CAMKVQ8NCB2 501 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 OR9A4Q8NGU2 314 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 SLC5A11Q8WWX8 675 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 TSNARE1Q96NA8 513 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 OR4K3Q96R72 315 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 GPR22Q99680 433 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 SMAD5Q99717 465 aaKnown RBP11.96□□□□□ -0.49
LRRC28-214ENST00000559433 EGFL8Q99944 293 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 MACROD1Q9BQ69 325 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 LRRC1Q9BTT6 524 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 MKKSQ9NPJ1 570 aaPredicted RBP11.96□□□□□ -0.49
LRRC28-214ENST00000559433 C14orf105Q9NVL8 296 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 C5AR2Q9P296 337 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 C3orf18Q9UK00 162 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 MRPS2Q9Y399 296 aaKnown RBP11.96□□□□□ -0.49
LRRC28-214ENST00000559433 DYRK1BQ9Y463 629 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 OARD1Q9Y530 152 aa11.96□□□□□ -0.49
LRRC28-214ENST00000559433 UBR5O95071 2799 aaPredicted RBP11.95□□□□□ -0.5
LRRC28-214ENST00000559433 IGLV3-12A0A075B6K2 115 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 MAP2K7O14733 419 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 PHGDHO43175 533 aaKnown RBP11.95□□□□□ -0.5
LRRC28-214ENST00000559433 FOXS1O43638 330 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 SLC35G6P0C7Q6 338 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 STMN1P16949 149 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 CXCR2P25025 360 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 CDKL1Q00532 357 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 GUCY2DQ02846 1103 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 MYBPC3Q14896 1274 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 SYT16Q17RD7 645 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 KBTBD12Q3ZCT8 623 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 KIRREL2Q6UWL6 708 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 PRSS41Q7RTY9 318 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 LAPTM4BQ86VI4 370 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 THOC6Q86W42 341 aaKnown RBP11.95□□□□□ -0.5
LRRC28-214ENST00000559433 ZADH2Q8N4Q0 377 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 TBC1D19Q8N5T2 526 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 PPM1NQ8N819 430 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 MFSD9Q8NBP5 474 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 ABHD11Q8NFV4 315 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 ZCCHC10Q8TBK6 192 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 CPT1CQ8TCG5 803 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 FBF1Q8TES7 1133 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 SLC13A3Q8WWT9 602 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 NEIL2Q969S2 332 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 FAM129AQ9BZQ8 928 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 UNKQ9C0B0 810 aaKnown RBP11.95□□□□□ -0.5
LRRC28-214ENST00000559433 DERL2Q9GZP9 239 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 LRRC4CQ9HCJ2 640 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 PLAAQ9Y263 795 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 MAP4K5Q9Y4K4 846 aa11.95□□□□□ -0.5
LRRC28-214ENST00000559433 TRBC2A0A5B9 178 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 NCF1BA6NI72 391 aaPredicted RBP11.94□□□□□ -0.5
LRRC28-214ENST00000559433 NCF1CA8MVU1 366 aaPredicted RBP11.94□□□□□ -0.5
LRRC28-214ENST00000559433 OR1F1O43749 312 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 LCMT2O60294 686 aaKnown RBP11.94□□□□□ -0.5
LRRC28-214ENST00000559433 FAM155BO75949 473 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 WISP3O95389 354 aaPredicted RBP11.94□□□□□ -0.5
LRRC28-214ENST00000559433 C1QAP02745 245 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 HEXBP07686 556 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 UQCRHP07919 91 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 CCDC166P0CW27 439 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 NCF1P14598 390 aaPredicted RBP11.94□□□□□ -0.5
LRRC28-214ENST00000559433 ACPPP15309 386 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 IL1RNP18510 177 aa11.94□□□□□ -0.5
LRRC28-214ENST00000559433 SPRP35270 261 aaPredicted RBP11.94□□□□□ -0.5
LRRC28-214ENST00000559433 HNMTP50135 292 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms