RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 HM13Q8TCT9 377 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 HPS1Q92902 700 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 CCDC138Q96M89 665 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 SGK2Q9HBY8 427 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 MRPL40Q9NQ50 206 aaKnown RBP11.28□□□□□ -0.6
SHMT2-212ENST00000554467 PPT2Q9UMR5 302 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 ASF1AQ9Y294 204 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 CCDC85CA6NKD9 419 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 MAGEB17A8MXT2 336 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 SOCS2O14508 198 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 RPS14P62263 151 aaKnown RBP11.28□□□□□ -0.6
SHMT2-212ENST00000554467 IFITM2Q01629 132 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 GRIK2Q13002 908 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 FGL2Q14314 439 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 PNCKQ6P2M8 343 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 PRMT9Q6P2P2 845 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 C11orf96Q7Z7L8 435 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 C10orf111Q8N326 155 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 L3MBTL4Q8NA19 623 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 ZNF740Q8NDX6 193 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 GTF2H4Q92759 462 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 OSBPL11Q9BXB4 747 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 ANKRD60Q9BZ19 345 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 LMAN2LQ9H0V9 348 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 OBP2AQ9NY56 170 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 NEUROG3Q9Y4Z2 214 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 MYO10Q9HD67 2058 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 JUPP14923 745 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 NR4A1P22736 598 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 TRAP1Q12931 704 aaKnown RBP11.28□□□□□ -0.6
SHMT2-212ENST00000554467 OXA1LQ15070 435 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 TMEM52BQ4KMG9 183 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 ZNF658BQ4V348 819 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-212ENST00000554467 OTUD3Q5T2D3 398 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-212ENST00000554467 NEK10Q6ZWH5 1172 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 HID1Q8IV36 788 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 OR7A2PQ8NGA2 310 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 OR10A6Q8NH74 314 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 OR14C36Q8NHC7 312 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 CDCA3Q99618 268 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-212ENST00000554467 CTRCQ99895 268 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 ZCCHC2Q9C0B9 1178 aaKnown RBP11.28□□□□□ -0.6
SHMT2-212ENST00000554467 SPNS1Q9H2V7 528 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 OSGEPL1Q9H4B0 414 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 SLC25A37Q9NYZ2 338 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 GPRC5BQ9NZH0 403 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 PLEKHM1Q9Y4G2 1056 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 A0A0C4DFX4 3053 aa11.28□□□□□ -0.6
SHMT2-212ENST00000554467 DHRS12A0PJE2 317 aa11.27□□□□□ -0.6
SHMT2-212ENST00000554467 QSOX1O00391 747 aa11.27□□□□□ -0.6
SHMT2-212ENST00000554467 HSD17B1P14061 328 aa11.27□□□□□ -0.6
SHMT2-212ENST00000554467 CDKN2CP42773 168 aa11.27□□□□□ -0.6
SHMT2-212ENST00000554467 RAB30Q15771 203 aa11.27□□□□□ -0.6
SHMT2-212ENST00000554467 CDKL4Q5MAI5 379 aa11.27□□□□□ -0.6
SHMT2-212ENST00000554467 CHST15Q7LFX5 561 aaPredicted RBP11.27□□□□□ -0.6
SHMT2-212ENST00000554467 MSRB3Q8IXL7 192 aa11.27□□□□□ -0.6
SHMT2-212ENST00000554467 OR10Q1Q8NGQ4 319 aa11.27□□□□□ -0.6
SHMT2-212ENST00000554467 ALPK1Q96QP1 1244 aa11.27□□□□□ -0.6
SHMT2-212ENST00000554467 HDAC8Q9BY41 377 aa11.27□□□□□ -0.6
SHMT2-212ENST00000554467 S1PR5Q9H228 398 aa11.27□□□□□ -0.6
SHMT2-212ENST00000554467 FBXL12Q9NXK8 326 aa11.27□□□□□ -0.6
SHMT2-212ENST00000554467 KIAA1549LQ6ZVL6 1849 aa11.27□□□□□ -0.61
SHMT2-212ENST00000554467 SDK1Q7Z5N4 2213 aa11.27□□□□□ -0.61
SHMT2-212ENST00000554467 TRIM64A6NGJ6 449 aa11.27□□□□□ -0.61
SHMT2-212ENST00000554467 H3BQ06 376 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-212ENST00000554467 ARNTLO00327 626 aa11.27□□□□□ -0.61
SHMT2-212ENST00000554467 HRH2P25021 359 aa11.27□□□□□ -0.61
SHMT2-212ENST00000554467 CDK3Q00526 305 aa11.27□□□□□ -0.61
SHMT2-212ENST00000554467 COQ5Q5HYK3 327 aa11.27□□□□□ -0.61
SHMT2-212ENST00000554467 OR4F3Q6IEY1 312 aa11.27□□□□□ -0.61
SHMT2-212ENST00000554467 NOXRED1Q6NXP6 359 aa11.27□□□□□ -0.61
SHMT2-212ENST00000554467 TTC33Q6PID6 262 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-212ENST00000554467 RASGRP3Q8IV61 690 aa11.27□□□□□ -0.61
SHMT2-212ENST00000554467 TRUB1Q8WWH5 349 aaKnown RBP11.27□□□□□ -0.61
SHMT2-212ENST00000554467 TFAP2CQ92754 450 aa11.27□□□□□ -0.61
SHMT2-212ENST00000554467 CLMPQ9H6B4 373 aa11.27□□□□□ -0.61
SHMT2-212ENST00000554467 ZFR2Q9UPR6 939 aaKnown RBP11.27□□□□□ -0.61
SHMT2-212ENST00000554467 TICRRQ7Z2Z1 1910 aa11.27□□□□□ -0.61
SHMT2-212ENST00000554467 KCNH1O95259 989 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 MATN1P21941 496 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 SLC7A1P30825 629 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 IDUAP35475 653 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 YAP1P46937 504 aaKnown RBP11.26□□□□□ -0.61
SHMT2-212ENST00000554467 IFITM3Q01628 133 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 DPTQ07507 201 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 SELENBP1Q13228 472 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 ADAM15Q13444 863 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 PON2Q15165 354 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 FAM46CQ5VWP2 391 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 GALNT18Q6P9A2 607 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 GCNT7Q6ZNI0 430 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 CLEC4FQ8N1N0 589 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 HUS1BQ8NHY5 278 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 FIG4Q92562 907 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 ELSPBP1Q96BH3 223 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 ZDHHC5Q9C0B5 715 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 KLHL3Q9UH77 587 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 PCM1Q15154 2024 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 ANKRD34BA5PLL1 514 aa11.26□□□□□ -0.61
SHMT2-212ENST00000554467 SLC31A1O15431 190 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms