RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SGF29Q96ES7 293 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 VPS39Q96JC1 886 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 OR2M4Q96R27 311 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 PAFAH2Q99487 392 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 GPR22Q99680 433 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 CCM2Q9BSQ5 444 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 NUSAP1Q9BXS6 441 aaKnown RBP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 ARRDC1-AS1Q9H2J1 176 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 VIPAS39Q9H9C1 493 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 WASH6PQ9NQA3 447 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 FBXO6Q9NRD1 293 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 SMYD2Q9NRG4 433 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 SPATS2LQ9NUQ6 558 aaKnown RBP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 DNAJC28Q9NX36 388 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 TAS2R13Q9NYV9 303 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 IL1RAPL1Q9NZN1 696 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 PSMC3IPQ9P2W1 217 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 SPASTQ9UBP0 616 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 ZNHIT2Q9UHR6 403 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 SCOCQ9UIL1 159 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 ACSL5Q9ULC5 683 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 SUFUQ9UMX1 484 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 TMEM98Q9Y2Y6 226 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 PCDHGB2Q9Y5G2 931 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 FANCMQ8IYD8 2048 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 MYLKQ15746 1914 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 TNRC6BQ9UPQ9 1833 aaKnown RBP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 TRPM6Q9BX84 2022 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 ATXN2Q99700 1313 aaKnown RBP5.59□□□□□ -1.51
SCAF11-213ENST00000550629 UQCRHLA0A096LP55 91 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 IQANK1A0A1B0GTG1 560 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 A0A1B0GTQ1 180 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 NEMP2A6NFY4 417 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 OR2AG2A6NM03 316 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 B5MCH6 92 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 E5RI56 91 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 LMO7DNF2Z398 122 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 TPP1O14773 563 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 PCDHGA12O60330 932 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 MTX2O75431 263 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 POP7O75817 140 aaKnown RBP5.59□□□□□ -1.51
SCAF11-213ENST00000550629 FAM155BO75949 473 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 SLCO2B1O94956 709 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 UQCRHP07919 91 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 ITGA2BP08514 1039 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 SNRPAP09012 282 aaKnown RBP5.59□□□□□ -1.51
SCAF11-213ENST00000550629 ENO3P13929 434 aaPredicted RBP5.59□□□□□ -1.51
SCAF11-213ENST00000550629 MTHFD2P13995 350 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 SLC2A4P14672 509 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 FDXRP22570 491 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 ZFP36P26651 326 aaKnown RBP5.59□□□□□ -1.51
SCAF11-213ENST00000550629 CRABP2P29373 138 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 FMO4P31512 558 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 GNPDA1P46926 289 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 SERPINB8P50452 374 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 CTSCP53634 463 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 SLC12A2P55011 1212 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 NANOS3P60323 173 aaKnown RBP5.59□□□□□ -1.51
SCAF11-213ENST00000550629 ARHGAP8P85298 464 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 IFFO1Q0D2I5 559 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 CASP8Q14790 479 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 ZKSCAN8Q15776 578 aaPredicted RBP5.59□□□□□ -1.51
SCAF11-213ENST00000550629 HLA-BQ31612 363 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 INAVAQ3KP66 663 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 ZNF789Q5FWF6 425 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 CTSL3PQ5NE16 218 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 PLEKHS1Q5SXH7 462 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 UBAP2Q5T6F2 1119 aaKnown RBP5.59□□□□□ -1.51
SCAF11-213ENST00000550629 METRNLQ641Q3 311 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 ZNF549Q6P9A3 640 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 FBXO38Q6PIJ6 1188 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 CNSTQ6PJW8 725 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 KDM7AQ6ZMT4 941 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 TIFABQ6ZNK6 161 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 Q6ZPA2 131 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 NEK10Q6ZWH5 1172 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 RHOUQ7L0Q8 258 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 OTOAQ7RTW8 1153 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 ZNF575Q86XF7 245 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 LDLRAD3Q86YD5 345 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 ULK2Q8IYT8 1036 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 ZBTB2Q8N680 514 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 ANKRD7Q92527 254 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 INPP5DQ92835 1189 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 TSACCQ96A04 125 aaPredicted RBP5.59□□□□□ -1.51
SCAF11-213ENST00000550629 PDXPQ96GD0 296 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 PDLIM5Q96HC4 596 aaKnown RBP5.59□□□□□ -1.51
SCAF11-213ENST00000550629 GSDMCQ9BYG8 508 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 STMN4Q9H169 189 aaPredicted RBP5.59□□□□□ -1.51
SCAF11-213ENST00000550629 DPEP2Q9H4A9 486 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 NCKIPSDQ9NZQ3 722 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 APOBEC3BQ9UH17 382 aaKnown RBP5.59□□□□□ -1.51
SCAF11-213ENST00000550629 LGALS13Q9UHV8 139 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 CLCA2Q9UQC9 943 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 CRYL1Q9Y2S2 319 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 MED16Q9Y2X0 877 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 DHRS7Q9Y394 339 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 NFS1Q9Y697 457 aa5.59□□□□□ -1.51
SCAF11-213ENST00000550629 ZNF292O60281 2723 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms