RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 PRAMEF12O95522 483 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 RBM34P42696 430 aaKnown RBP15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 LEPRP48357 1165 aaKnown RBP15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 ARCN1P48444 511 aaKnown RBP15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 AGTR2P50052 363 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 TCEA2Q15560 299 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 PRSS48Q7RTY5 328 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 JAZF1Q86VZ6 243 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 SNX29P2Q8IUI4 249 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 ADGRG2Q8IZP9 1017 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 LINC00471Q8N535 108 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 C1orf52Q8N6N3 182 aaKnown RBP15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 ZNF615Q8N8J6 731 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 INO80EQ8NBZ0 244 aaPredicted RBP15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 ZNF248Q8NDW4 579 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 ZMIZ2Q8NF64 920 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 ZFP90Q8TF47 636 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 POPDC3Q9HBV1 291 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 ENPP5Q9UJA9 477 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 PTGDR2Q9Y5Y4 395 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 J3KR12 359 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 TRIM3O75382 744 aaPredicted RBP15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 SNAPC5O75971 98 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 GNAO1P09471 354 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 CDH11P55287 796 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 ZNF252P-AS1Q0IIN9 211 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 MAP2K5Q13163 448 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 DESI1Q6ICB0 168 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 PGM2L1Q6PCE3 622 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 OR5AK3PQ8NH89 298 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 RNF31Q96EP0 1072 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 KCNH6Q9H252 994 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 ANKMY1Q9P2S6 941 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 IFT52Q9Y366 437 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 ALG5Q9Y673 324 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 GTPBP1O00178 669 aaKnown RBP15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 SLC25A12O75746 678 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 VIPP01282 170 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 GPR33Q49SQ1 333 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 NFKBIDQ8NI38 313 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 FERD3LQ96RJ6 166 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 SLA2Q9H6Q3 261 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 ZCCHC3Q9NUD5 404 aaKnown RBP15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 EXTL2Q9UBQ6 330 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 DNAJC15Q9Y5T4 150 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 ARL6IP5O75915 188 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 GBX2P52951 348 aaPredicted RBP15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 ZNF280AP59817 542 aaPredicted RBP15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 LIPKQ5VXJ0 399 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 ANKRD26P1Q6NSI1 321 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 LRRC70Q7Z2Q7 622 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 GPR142Q7Z601 462 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 CHERPQ8IWX8 916 aaKnown RBP15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 RHEBL1Q8TAI7 183 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 HYLS1Q96M11 299 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 TRIM36Q9NQ86 728 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 TMEM181Q9P2C4 612 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 GTF2IRD1Q9UHL9 959 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 FCF1Q9Y324 198 aaKnown RBP15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 PPEF2O14830 753 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 SEPT4O43236 478 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 CKMT1AP12532 417 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 PRKACBP22694 351 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 GRB14Q14449 540 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 TBC1D25Q3MII6 688 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 C15orf39Q6ZRI6 1047 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 TSPYL5Q86VY4 417 aaPredicted RBP15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 CFAP206Q8IYR0 622 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 RFT1Q96AA3 541 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 RTP4Q96DX8 246 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 ZNF599Q96NL3 588 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 XYLT2Q9H1B5 865 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 MINDY3Q9H8M7 445 aa15.34■□□□□ 0.05
RBFOX1-212ENST00000550418 A0A075B6Q4 140 aa15.33■□□□□ 0.05
RBFOX1-212ENST00000550418 ZBTB48P10074 688 aaPredicted RBP15.33■□□□□ 0.05
RBFOX1-212ENST00000550418 HK1P19367 917 aa15.33■□□□□ 0.05
RBFOX1-212ENST00000550418 KDELR2P33947 212 aa15.33■□□□□ 0.05
RBFOX1-212ENST00000550418 NDUFA9Q16795 377 aa15.33■□□□□ 0.05
RBFOX1-212ENST00000550418 ZNF630Q2M218 657 aaPredicted RBP15.33■□□□□ 0.05
RBFOX1-212ENST00000550418 KIF18BQ86Y91 864 aa15.33■□□□□ 0.05
RBFOX1-212ENST00000550418 C15orf40Q8WUR7 153 aa15.33■□□□□ 0.05
RBFOX1-212ENST00000550418 DNAJA4Q8WW22 397 aaPredicted RBP15.33■□□□□ 0.05
RBFOX1-212ENST00000550418 DEDD2Q8WXF8 326 aa15.33■□□□□ 0.05
RBFOX1-212ENST00000550418 ZNF354BQ96LW1 612 aa15.33■□□□□ 0.05
RBFOX1-212ENST00000550418 CORO1BQ9BR76 489 aa15.33■□□□□ 0.05
RBFOX1-212ENST00000550418 TTLL2Q9BWV7 592 aa15.33■□□□□ 0.05
RBFOX1-212ENST00000550418 TREM1Q9NP99 234 aa15.33■□□□□ 0.05
RBFOX1-212ENST00000550418 RNF11Q9Y3C5 154 aa15.33■□□□□ 0.05
RBFOX1-212ENST00000550418 PCDHGB5Q9Y5G0 923 aa15.33■□□□□ 0.05
RBFOX1-212ENST00000550418 MMP3P08254 477 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 CD1DP15813 335 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 MLLT6P55198 1093 aaPredicted RBP15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 PPP2R2DQ66LE6 453 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 SPARTQ8N0X7 666 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 SCRN2Q96FV2 425 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 C1QTNF7Q9BXJ2 289 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 BTBD1Q9H0C5 482 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 HCN3Q9P1Z3 774 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 PRODHO43272 600 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 CLK3P49761 638 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms