RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-225	ENST00000545920	FAM193B	Q96PV7	902 aa	Predicted RBP	6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	LYSMD1	Q96S90	227 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	TM9SF2	Q99805	663 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	EGFL8	Q99944	293 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	TMEM175	Q9BSA9	504 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	DGCR6L	Q9BY27	220 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	GPR63	Q9BZJ6	419 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	NRSN2	Q9GZP1	204 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	SLIRP	Q9GZT3	109 aa	Known RBP	6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	CCDC90B	Q9GZT6	254 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	SERHL	Q9NQF3	203 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	AASDHPPT	Q9NRN7	309 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	INIP	Q9NRY2	104 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	KRT84	Q9NSB2	600 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	FKBP14	Q9NWM8	211 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	ADPRHL2	Q9NX46	363 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	SLC25A37	Q9NYZ2	338 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	CNOT2	Q9NZN8	540 aa	Known RBP	6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	RNF181	Q9P0P0	153 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	KIF17	Q9P2E2	1029 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	CRNN	Q9UBG3	495 aa	Predicted RBP	6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	BTNL2	Q9UIR0	455 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	NUDT5	Q9UKK9	219 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	IKZF3	Q9UKT9	509 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	MAFF	Q9ULX9	164 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	TRAPPC4	Q9Y296	219 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	GRIP1	Q9Y3R0	1128 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	TESMIN	Q9Y4I5	508 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920	SHROOM3	Q8TF72	1996 aa		6.27	□□□□□ -1.41
SNHG1-225	ENST00000545920		A0A075B6Q4	140 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	MTMR11	A4FU01	709 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	EFCAB10	A6NFE3	127 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	MANSC4	A6NHS7	340 aa	Predicted RBP	6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	AGAP5	A6NIR3	686 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	METTL15	A6NJ78	407 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	CCDC85C	A6NKD9	419 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	CENPBD1	B2RD01	187 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	PTGES3L	E9PB15	166 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	TAPBP	O15533	448 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	B4GAT1	O43505	415 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	ASNA1	O43681	348 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	NOBOX	O60393	691 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	FAM20B	O75063	409 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	AP2A2	O94973	939 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	PGLS	O95336	258 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	RPLP0	P05388	317 aa	Known RBP	6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	RB1	P06400	928 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	CNP	P09543	421 aa	Known RBP	6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	PABPC1	P11940	636 aa	Known RBP	6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	PCNA	P12004	261 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	PIP	P12273	146 aa	Predicted RBP	6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	CD36	P16671	472 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	EPHA1	P21709	976 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	ACRV1	P26436	265 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	PSMB9	P28065	219 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	ADH6	P28332	368 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	PTPN6	P29350	595 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	KDELR2	P33947	212 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	PCGF2	P35227	344 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	THPO	P40225	353 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	PIK3CB	P42338	1070 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	GSS	P48637	474 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	HSPA7	P48741	367 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	ALDH7A1	P49419	539 aa	Known RBP	6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	PGF	P49763	221 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	AFF1	P51825	1210 aa	Known RBP	6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	MLLT10	P55197	1068 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	YBX1	P67809	324 aa	Known RBP	6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	BEX3	Q00994	111 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	NPRL3	Q12980	569 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	NFATC2	Q13469	925 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	SQSTM1	Q13501	440 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	GBX1	Q14549	363 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	PHKG1	Q16816	387 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	LDLRAP1	Q5SW96	308 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	PRAMEF19	Q5SWL8	479 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	PLEKHS1	Q5SXH7	462 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	HECTD3	Q5T447	861 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	RNLS	Q5VYX0	342 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	LIPJ	Q5W064	366 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	CES5A	Q6NT32	575 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	RETSAT	Q6NUM9	610 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	CHST15	Q7LFX5	561 aa	Predicted RBP	6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	ZNF367	Q7RTV3	350 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	GPR155	Q7Z3F1	870 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	DEFB132	Q7Z7B7	95 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	AKAP14	Q86UN6	197 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	SERPINA9	Q86WD7	417 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	ZSWIM9	Q86XI8	627 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	MIB1	Q86YT6	1006 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	ZZZ3	Q8IYH5	903 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	CADM3	Q8N126	398 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	NATD1	Q8N6N6	113 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	C2orf69	Q8N8R5	385 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	DCAF4L2	Q8NA75	395 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	IL17RC	Q8NAC3	791 aa		6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	HJURP	Q8NCD3	748 aa	Predicted RBP	6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	ST13P5	Q8NFI4	369 aa	Predicted RBP	6.26	□□□□□ -1.41
SNHG1-225	ENST00000545920	OR7D4	Q8NG98	312 aa		6.26	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms