RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 CYP1B1Q16678 543 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 RALGPS1Q5JS13 557 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 UBE2UQ5VVX9 321 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 CGB2Q6NT52 195 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 THAP5Q7Z6K1 395 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 BPHLQ86WA6 291 aaPredicted RBP8.35□□□□□ -1.07
CLIP1-218ENST00000545889 PNPT1Q8TCS8 783 aaKnown RBP8.35□□□□□ -1.07
CLIP1-218ENST00000545889 SLC25A36Q96CQ1 311 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 ITPKCQ96DU7 683 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 LRIG1Q96JA1 1093 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 SLC22A12Q96S37 553 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 HBEGFQ99075 208 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 CGREF1Q99674 301 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 ZNF334Q9HCZ1 680 aaPredicted RBP8.35□□□□□ -1.07
CLIP1-218ENST00000545889 C8orf4Q9NR00 106 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 ABCB10Q9NRK6 738 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 ZDHHC18Q9NUE0 388 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 ATPIF1Q9UII2 106 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 MRPS7Q9Y2R9 242 aaKnown RBP8.35□□□□□ -1.07
CLIP1-218ENST00000545889 TIMM22Q9Y584 194 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 RBBP6Q7Z6E9 1792 aaKnown RBP8.35□□□□□ -1.07
CLIP1-218ENST00000545889 ZNF646O15015 1829 aaPredicted RBP8.35□□□□□ -1.07
CLIP1-218ENST00000545889 TMX2-CTNND1H3BSU7 103 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 ICMTO60725 284 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 SLC22A3O75751 556 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 SYNGR4O95473 234 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 CXCR1P25024 350 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 TNFRSF4P43489 277 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 RAB8AP61006 207 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 CST6Q15828 149 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 ZNF805Q5CZA5 627 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 TOR1AIP1Q5JTV8 583 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 LRRC66Q68CR7 880 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 SLC9A4Q6AI14 798 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 ZDHHC24Q6UX98 284 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 NPWQ8N729 165 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 C19orf18Q8NEA5 215 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 TM9SF4Q92544 642 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 KHSRPQ92945 711 aaKnown RBP eCLIP8.35□□□□□ -1.072e-6■■■■□ 20.7
CLIP1-218ENST00000545889 PYCR2Q96C36 320 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 MARK4Q96L34 752 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 TTYH1Q9H313 450 aaPredicted RBP8.35□□□□□ -1.07
CLIP1-218ENST00000545889 FBRSQ9HAH7 460 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 CMTM6Q9NX76 183 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 RAPGEFL1Q9UHV5 662 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 A0A087WXM4 84 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 IQCMA0A1B0GVH7 501 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 DUXAA6NLW8 204 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 GPR37L1O60883 481 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 ASGR2P07307 311 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 F7P08709 466 aaPredicted RBP8.35□□□□□ -1.07
CLIP1-218ENST00000545889 OGNP20774 298 aaKnown RBP8.35□□□□□ -1.07
CLIP1-218ENST00000545889 RAB28P51157 221 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 AKR1D1P51857 326 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 PKNOX1P55347 436 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 KLF1Q13351 362 aaPredicted RBP8.35□□□□□ -1.07
CLIP1-218ENST00000545889 SLBPQ14493 270 aaKnown RBP eCLIP8.35□□□□□ -1.07
CLIP1-218ENST00000545889 TCEAL6Q6IPX3 200 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 SPESP1Q6UW49 350 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 NAPRTQ6XQN6 538 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 MBOAT1Q6ZNC8 495 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 RANBP3LQ86VV4 465 aaPredicted RBP8.35□□□□□ -1.07
CLIP1-218ENST00000545889 ALDH16A1Q8IZ83 802 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 PQLC1Q8N2U9 271 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 SVOPQ8N4V2 548 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 ZNF527Q8NB42 609 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 Q96MT0 163 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 Q9N2J8 555 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 HMG20AQ9NP66 347 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 DKKL1Q9UK85 242 aa8.35□□□□□ -1.07
CLIP1-218ENST00000545889 TCRBV9S1A1TA0A576 114 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 CCNKO75909 580 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 OR2B3O76000 313 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 HLA-DQB2P05538 268 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 ZNF37AP17032 561 aaPredicted RBP8.34□□□□□ -1.07
CLIP1-218ENST00000545889 SHMT2P34897 504 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 BTN3A2P78410 334 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 TDGQ13569 410 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 SQLEQ14534 574 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 GFOD2Q3B7J2 385 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 DDI2Q5TDH0 399 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 ABHD17BQ5VST6 288 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 SPRED2Q7Z698 418 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 OR13C4Q8NGS5 318 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 OR6N1Q8NGY5 312 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 RPLP0P6Q8NHW5 317 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 C12orf43Q96C57 262 aaKnown RBP8.34□□□□□ -1.07
CLIP1-218ENST00000545889 HSPA12BQ96MM6 686 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 PTCHD1Q96NR3 888 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 SPRTNQ9H040 489 aaPredicted RBP8.34□□□□□ -1.07
CLIP1-218ENST00000545889 CXorf21Q9HAI6 301 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 FKBP14Q9NWM8 211 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 ACSL5Q9ULC5 683 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.34□□□□□ -1.07
CLIP1-218ENST00000545889 USP3Q9Y6I4 520 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 PMF1-BGLAPU3KQ54 211 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 TTC34A8MYJ7 566 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 C2orf74A8MZ97 194 aa8.34□□□□□ -1.07
CLIP1-218ENST00000545889 DBTP11182 482 aaKnown RBP8.34□□□□□ -1.07
CLIP1-218ENST00000545889 TPSB2P20231 275 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms