RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 URADA6NGE7 173 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 CAPN15O75808 1086 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 GNRH1P01148 92 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 GALNT1Q10472 559 aaPredicted RBP18.79■□□□□ 0.6
SUDS3-204ENST00000543473 NPRL3Q12980 569 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 ENPP6Q6UWR7 440 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 DNAJB7Q7Z6W7 309 aaPredicted RBP18.79■□□□□ 0.6
SUDS3-204ENST00000543473 CHERPQ8IWX8 916 aaKnown RBP18.79■□□□□ 0.6
SUDS3-204ENST00000543473 TMED9Q9BVK6 235 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.79■□□□□ 0.6
SUDS3-204ENST00000543473 GABRQQ9UN88 632 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 B4GAT1O43505 415 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 KIAA0513O60268 411 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 OR2B3O76000 313 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 VIPP01282 170 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 ALPIP09923 528 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 RPL10P27635 214 aaKnown RBP18.79■□□□□ 0.6
SUDS3-204ENST00000543473 CD40LGP29965 261 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 MPPE1Q53F39 396 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 SMYD5Q6GMV2 418 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 ZBED3Q96IU2 234 aaPredicted RBP18.79■□□□□ 0.6
SUDS3-204ENST00000543473 HAPLN2Q9GZV7 340 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 SLC35C2Q9NQQ7 365 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 ABCG2Q9UNQ0 655 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 EDNRBP24530 442 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 ZFAND4Q86XD8 727 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 C16orf70Q9BSU1 422 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 EPOP01588 193 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 KDELR2P33947 212 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 MAGEA6P43360 314 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 CRISP3P54108 245 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 SERPINA13PQ6UXR4 307 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 TCEANCQ8N8B7 351 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 BCL7BQ9BQE9 202 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 ELAC1Q9H777 363 aaKnown RBP18.79■□□□□ 0.6
SUDS3-204ENST00000543473 SMURF1Q9HCE7 757 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 HCN2Q9UL51 889 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 CLCA3PQ9Y6N3 262 aa18.79■□□□□ 0.6
SUDS3-204ENST00000543473 TCRBV3S1A0A5B6 114 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 ZSCAN5BA6NJL1 495 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 STSP08842 583 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 CDKN2DP55273 166 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 DEFA5Q01523 94 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 IMP3Q9NV31 184 aaKnown RBP18.78■□□□□ 0.6
SUDS3-204ENST00000543473 CALML5Q9NZT1 146 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 RGS17Q9UGC6 210 aaPredicted RBP18.78■□□□□ 0.6
SUDS3-204ENST00000543473 PLCH1Q4KWH8 1693 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 C7orf72A4D263 438 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 GRM6O15303 877 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 IFNA6P05013 189 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 SMSP52788 366 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 AP1S2P56377 157 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 TCEA2Q15560 299 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 VMACQ2NL98 169 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 PTCHD3Q3KNS1 767 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 ADGRG5Q8IZF4 528 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 OR4C6Q8NH72 309 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 ARNTL2Q8WYA1 636 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 AGPAT4Q9NRZ5 378 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 ZCCHC3Q9NUD5 404 aaKnown RBP18.78■□□□□ 0.6
SUDS3-204ENST00000543473 HSPE1-MOB4S4R3N1 261 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 MATN4O95460 622 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 TGFB1P01137 390 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 SLC9A3P48764 834 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 PRR5P85299 388 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 PLA2G4EQ3MJ16 856 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 NPAS3Q8IXF0 933 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 RGL4Q8IZJ4 473 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 KRTCAP2Q8N6L1 136 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 CD244Q9BZW8 370 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 RSPH9Q9H1X1 276 aaPredicted RBP18.78■□□□□ 0.6
SUDS3-204ENST00000543473 A0A096LPI6 279 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 CENPBD1B2RD01 187 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 ENTPD6O75354 484 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 KCNE1P15382 129 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 GGT1P19440 569 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 PIK3CBP42338 1070 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 PON2Q15165 354 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 SLC25A24Q6NUK1 477 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 SHQ1Q6PI26 577 aaKnown RBP18.78■□□□□ 0.6
SUDS3-204ENST00000543473 DNASE1L2Q92874 299 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 PPP1R14AQ96A00 147 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 CMTM7Q96FZ5 175 aa18.78■□□□□ 0.6
SUDS3-204ENST00000543473 SDR39U1Q9NRG7 319 aaPredicted RBP18.78■□□□□ 0.6
SUDS3-204ENST00000543473 MARCH4Q9P2E8 410 aaPredicted RBP18.78■□□□□ 0.6
SUDS3-204ENST00000543473 OXTRP30559 389 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 OR1E2P47887 323 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 SERINC3Q13530 473 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 RPTNQ6XPR3 784 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 FBXO22Q8NEZ5 403 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 ING5Q8WYH8 240 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 MNTQ99583 582 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 ZNF451Q9Y4E5 1061 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 HMGN1P05114 100 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 ACRP10323 421 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 LRP8Q14114 963 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 ISCA2Q86U28 154 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 ZSWIM9Q86XI8 627 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 SPARTQ8N0X7 666 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 RPL10LQ96L21 214 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms