RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 MUL1Q969V5 352 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 TRIM43Q96BQ3 446 aaPredicted RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 AP2M1Q96CW1 435 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 COQ8BQ96D53 544 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 DTD2Q96FN9 168 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 PKP4Q99569 1192 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 BCL7BQ9BQE9 202 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 DCUN1D5Q9BTE7 237 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ZCCHC2Q9C0B9 1178 aaKnown RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 LINC00597Q9H2U6 94 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 NOTCH4Q99466 2003 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 NUP210Q8TEM1 1887 aaPredicted RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 A0A1W2PPW3 197 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 RNASET2O00584 256 aaKnown RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 RFPL2O75678 378 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF682O95780 498 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 POU2F2P09086 479 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ACRP10323 421 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 LAMP1P11279 417 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 MATN1P21941 496 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 TIA1P31483 386 aaKnown RBP eCLIP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 PREPP48147 710 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 SPIDRQ14159 915 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 LRRC26Q2I0M4 334 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF648Q5T619 568 aaPredicted RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 CPTPQ5TA50 214 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 SLCO4C1Q6ZQN7 724 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF621Q6ZSS3 439 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 NPAS3Q8IXF0 933 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 CLECL1Q8IZS7 167 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 TEX19Q8NA77 164 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 VPS37AQ8NEZ2 397 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 OR7G3Q8NG95 312 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 FAM81AQ8TBF8 368 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 SP7Q8TDD2 431 aaPredicted RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 THAP11Q96EK4 314 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 MED8Q96G25 268 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 COQ10AQ96MF6 247 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 MTERF1Q99551 399 aaKnown RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ASPSCR1Q9BZE9 553 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 NAA50Q9GZZ1 169 aaKnown RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 LHPPQ9H008 270 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 EHD1Q9H4M9 534 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 TPT1P8Q9HAU6 139 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 IL23AQ9NPF7 189 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF282Q9UDV7 671 aaPredicted RBP6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ATP6V1HQ9UI12 483 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 ABCG2Q9UNQ0 655 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 INSL6Q9Y581 213 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 SNX5Q9Y5X3 404 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 WNT6Q9Y6F9 365 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 KCNE2Q9Y6J6 123 aa6.32□□□□□ -1.4
PTPRO-208ENST00000542557 DOCK6Q96HP0 2047 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 MUC22E2RYF6 1773 aaPredicted RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 A0A0J9YVX5 310 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 H3BM21 787 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 FOXE1O00358 373 aaPredicted RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 HOXC11O43248 304 aaPredicted RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 MRPS14O60783 128 aaKnown RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 XYLBO75191 536 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 JRKO75564 520 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 ETHE1O95571 254 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 CISD3P0C7P0 127 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 JUNDP17535 347 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 IDSP22304 550 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 PCGF2P35227 344 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 STT3AP46977 705 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 RXRGP48443 463 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 DDX39BQ13838 428 aaKnown RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 ACOX1Q15067 660 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 TEAD4Q15561 434 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 CCSMST1Q4G0I0 132 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 FGD3Q5JSP0 725 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 PLPP4Q5VZY2 271 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 ANKRD34AQ69YU3 496 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 MED27Q6P2C8 311 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 TMEM220Q6QAJ8 160 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 CYP4Z1Q86W10 505 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 HORMAD1Q86X24 394 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 C1orf52Q8N6N3 182 aaKnown RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF513Q8N8E2 541 aaPredicted RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 GOT1L1Q8NHS2 421 aaPredicted RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 HUS1BQ8NHY5 278 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 TBC1D15Q8TC07 691 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 SORCS1Q8WY21 1168 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 MYLIPQ8WY64 445 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 SH3KBP1Q96B97 665 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 HSH2DQ96JZ2 352 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 EFCAB11Q9BUY7 163 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 BHLHE41Q9C0J9 482 aaPredicted RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 LTB4R2Q9NPC1 389 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 BAG5Q9UL15 447 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 PSME2Q9UL46 239 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 FAF1Q9UNN5 650 aaPredicted RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 ERVK-11Q9UQG0 969 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 SLC27A6Q9Y2P4 619 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 HEMK1Q9Y5R4 338 aaPredicted RBP6.31□□□□□ -1.4
PTPRO-208ENST00000542557 U3KQV3 271 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 E9PQ18 207 aa6.31□□□□□ -1.4
PTPRO-208ENST00000542557 YY2O15391 372 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms