RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	TRADD	Q15628	312 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	HKDC1	Q2TB90	917 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	VWA5B1	Q5TIE3	1220 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	TMEM214	Q6NUQ4	689 aa	Known RBP	11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	MBOAT1	Q6ZNC8	495 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	ASB18	Q6ZVZ8	466 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	FRA10AC1	Q70Z53	315 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	PPP1R32	Q7Z5V6	425 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	ASPG	Q86U10	573 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	CCDC25	Q86WR0	208 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	CTAGE3P	Q8IX95	158 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	PPM1N	Q8N819	430 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	TTL	Q8NG68	377 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	SLC13A3	Q8WWT9	602 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	SLC5A11	Q8WWX8	675 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	COL26A1	Q96A83	441 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	RHBDF1	Q96CC6	855 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	OR4K3	Q96R72	315 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	FMO2	Q99518	471 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	ACSS3	Q9H6R3	686 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	ATP13A2	Q9NQ11	1180 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	GPR83	Q9NYM4	423 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	DMGDH	Q9UI17	866 aa	Known RBP	11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	ZFP69B	Q9UJL9	534 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	TP53TG5	Q9Y2B4	290 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	DYRK1B	Q9Y463	629 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	HS3ST3B1	Q9Y662	390 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	DOCK10	Q96BY6	2186 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	URAD	A6NGE7	173 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	CDC7	O00311	574 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	SLC28A2	O43868	658 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	DPM1	O60762	260 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	MED26	O95402	600 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	GUCA1C	O95843	209 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	ALPP	P05187	535 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	CCDC166	P0CW27	439 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	CDH1	P12830	882 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	CD1D	P15813	335 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	GNAZ	P19086	355 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	SAT1	P21673	171 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	OTX2	P32243	289 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	HPD	P32754	393 aa	Predicted RBP	11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	BCL6	P41182	706 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	OR1D4	P47884	311 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	CCL11	P51671	97 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	AP2B1	P63010	937 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	PCDH1	Q08174	1060 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	E2F2	Q14209	437 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	HERC3	Q15034	1050 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	TSN	Q15631	228 aa	Known RBP	11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	ATG9B	Q674R7	924 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	SULT1C3	Q6IMI6	304 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	METTL2B	Q6P1Q9	378 aa	Known RBP	11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	NXPE4	Q6UWF7	544 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	IGFL3	Q6UXB1	125 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	CAPN12	Q6ZSI9	719 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	THOC6	Q86W42	341 aa	Known RBP	11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	GPSM1	Q86YR5	675 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	AFAP1L2	Q8N4X5	818 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	AMER3	Q8N944	861 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	EIF1AD	Q8N9N8	165 aa	Known RBP	11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	PDPR	Q8NCN5	879 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	TRPV3	Q8NET8	790 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	RHEBL1	Q8TAI7	183 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	STAG3L4	Q8TBR4	150 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	NT5C	Q8TCD5	201 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	ZNF592	Q92610	1267 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	NEIL2	Q969S2	332 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	AIF1L	Q9BQI0	150 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	NT5DC2	Q9H857	520 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	SYNPO2L	Q9H987	977 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	NMRAL1	Q9HBL8	299 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	CTSF	Q9UBX1	484 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	IKZF3	Q9UKT9	509 aa		11.69	□□□□□ -0.54
CLTCL1-205	ENST00000538828	LOC102723996	A0A087X1L8	192 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	ESYT3	A0FGR9	886 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	NPEPPSL1	A6NEC2	478 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	SOCS6	O14544	535 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	P2RX6	O15547	441 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	LCMT2	O60294	686 aa	Known RBP	11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	HP	P00738	406 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	SLC35E2B	P0CK96	405 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	CNTF	P26441	200 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	SCTR	P47872	440 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	REEP5	Q00765	189 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	KLC1	Q07866	573 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	ZNF460	Q14592	562 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	SLMAP	Q14BN4	828 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	TUBB8	Q3ZCM7	444 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	CPZ	Q66K79	652 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	KIRREL2	Q6UWL6	708 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	TBC1D1	Q86TI0	1168 aa	Predicted RBP	11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	SPNS2	Q8IVW8	549 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	GALNT16	Q8N428	558 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	TEX19	Q8NA77	164 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	NOA1	Q8NC60	698 aa	Known RBP	11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	ISL2	Q96A47	359 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	PYCR2	Q96C36	320 aa		11.68	□□□□□ -0.54
CLTCL1-205	ENST00000538828	WDR34	Q96EX3	536 aa		11.68	□□□□□ -0.54

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