RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-215	ENST00000537296	CSHL1	Q14406	222 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	NAA25	Q14CX7	972 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	TGFBI	Q15582	683 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	UAP1	Q16222	522 aa	Predicted RBP	10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	NKG7	Q16617	165 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	SYT16	Q17RD7	645 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	FAM214A	Q32MH5	1076 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	GLE1	Q53GS7	698 aa	Known RBP	10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	MROH9	Q5TGP6	573 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	OVCH1	Q7RTY7	1134 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	PPP1R32	Q7Z5V6	425 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	THOC6	Q86W42	341 aa	Known RBP	10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	PTRH1	Q86Y79	214 aa	Known RBP	10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	RELL1	Q8IUW5	271 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	PRSS58	Q8IYP2	241 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	CEP112	Q8N8E3	955 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	OR2Y1	Q8NGV0	311 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	RERG	Q96A58	199 aa	Predicted RBP	10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	RHBDF1	Q96CC6	855 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	MOCOS	Q96EN8	888 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	TSPAN17	Q96FV3	270 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	UBXN10	Q96LJ8	280 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	SPSB2	Q99619	263 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	EGFL8	Q99944	293 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	TMEM79	Q9BSE2	394 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	DHRS4	Q9BTZ2	278 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	PCBD2	Q9H0N5	130 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	SOX17	Q9H6I2	414 aa	Predicted RBP	10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	ACSS3	Q9H6R3	686 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	ZNF304	Q9HCX3	659 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	MTRF1L	Q9UGC7	380 aa	Known RBP	10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	TLK1	Q9UKI8	766 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	SLC22A14	Q9Y267	594 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	TP53TG5	Q9Y2B4	290 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	ASB1	Q9Y576	335 aa		10.32	□□□□□ -0.76
LDHA-215	ENST00000537296	GCN1	Q92616	2671 aa	Known RBP	10.31	□□□□□ -0.76
LDHA-215	ENST00000537296		A0A0A6YYC8	382 aa	Predicted RBP	10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	PABPN1L	A6NDY0	278 aa	Known RBP	10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	PYCARD-AS1	I3L0S3	204 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296		I3L1I5	382 aa	Predicted RBP	10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	TAPBP	O15533	448 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	ALOX12B	O75342	701 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	FAM153B	P0C7A2	387 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	CCND1	P24385	295 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	CSRP3	P50461	194 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	EFNA3	P52797	238 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	MAT1A	Q00266	395 aa	Known RBP	10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	RELA	Q04206	551 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	C19orf57	Q0VDD7	668 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	FAM153C	Q494X1	144 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	VWA2	Q5GFL6	755 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	YOD1	Q5VVQ6	348 aa	Predicted RBP	10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	RAPH1	Q70E73	1250 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	FRA10AC1	Q70Z53	315 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	MRGPRE	Q86SM8	312 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	ADAMTSL2	Q86TH1	951 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	APLF	Q8IW19	511 aa	Predicted RBP	10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	GSPT2	Q8IYD1	628 aa	Known RBP	10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	AMER2	Q8N7J2	671 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	AMER3	Q8N944	861 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	KCT2	Q8NC54	265 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	ABHD11	Q8NFV4	315 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	OR4K1	Q8NGD4	311 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	THAP4	Q8WY91	577 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	EXT2	Q93063	718 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	COL26A1	Q96A83	441 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	FKBP10	Q96AY3	582 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	HAUS8	Q9BT25	410 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	ING2	Q9H160	280 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	SLC25A18	Q9H1K4	315 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	ADNP	Q9H2P0	1102 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	IGSF5	Q9NSI5	407 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	ARGLU1	Q9NWB6	273 aa	Predicted RBP	10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	PADI2	Q9Y2J8	665 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	SPTA1	P02549	2419 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	DOCK10	Q96BY6	2186 aa		10.31	□□□□□ -0.76
LDHA-215	ENST00000537296	KCNE1B	A0A087WTH5	132 aa		10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	RFPL1	O75677	317 aa		10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	WDR47	O94967	919 aa		10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	B3GALT4	O96024	378 aa		10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	ALDOA	P04075	364 aa	Known RBP	10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	ANXA5	P08758	320 aa		10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	VARS	P26640	1264 aa	Known RBP	10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	SLC6A12	P48065	614 aa		10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	CCL11	P51671	97 aa		10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	RPS15A	P62244	130 aa	Known RBP	10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	CDKL1	Q00532	357 aa		10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	NAB1	Q13506	487 aa		10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	RAPSN	Q13702	412 aa		10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	SSPN	Q14714	243 aa		10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	MUM1	Q2TAK8	710 aa		10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	ISCA2	Q86U28	154 aa		10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	CENPL	Q8N0S6	344 aa	Predicted RBP	10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	OR9A4	Q8NGU2	314 aa		10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	C9orf43	Q8TAL5	461 aa	Predicted RBP	10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	ZCCHC10	Q8TBK6	192 aa		10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	KCTD4	Q8WVF5	259 aa		10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	SLC5A11	Q8WWX8	675 aa		10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	ATL1	Q8WXF7	558 aa		10.3	□□□□□ -0.76
LDHA-215	ENST00000537296	NXNL1	Q96CM4	212 aa		10.3	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 51 ms