RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	CENPM	Q9NSP4	180 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PSMD7	P51665	324 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	GPR107	Q5VW38	600 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	AMIGO1	Q86WK6	493 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TICAM1	Q8IUC6	712 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	LINC00471	Q8N535	108 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TMEM40	Q8WWA1	233 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	SORCS1	Q8WY21	1168 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ZNF358	Q9NW07	568 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	FAM120C	Q9NX05	1096 aa	Known RBP	15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TAS2R9	Q9NYW1	312 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PCDHGB1	Q9Y5G3	927 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	DAPL1	A0PJW8	107 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ASGR2	P07307	311 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MPC1L	P0DKB6	136 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	C8orf89	P0DMQ9	161 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ZNF3	P17036	446 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ENDOU	P21128	410 aa	Known RBP	15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	HSD11B1	P28845	292 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CXCL12	P48061	93 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PCBP2	Q15366	365 aa	Known RBP eCLIP	15.26	■□□□□ 0.03	5e-7	■■■■■ 29.1
NCAPD3-213	ENST00000534532	NRROS	Q86YC3	692 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PROKR2	Q8NFJ6	384 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	GEMIN6	Q8WXD5	167 aa	Known RBP	15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	IMP4	Q96G21	291 aa	Known RBP	15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	HERPUD2	Q9BSE4	406 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TCF7L1	Q9HCS4	588 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	BEST1	O76090	585 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	C6	P13671	934 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	HSF2	Q03933	536 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CLLU1OS	Q5K130	101 aa		15.26	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MBLAC1	A4D2B0	266 aa	Predicted RBP	15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PTGES	O14684	152 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MID1	O15344	667 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	BCHE	P06276	602 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	HBQ1	P09105	142 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	EEFSEC	P57772	596 aa	Known RBP	15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TGFBI	Q15582	683 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	USP53	Q70EK8	1073 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TMEM234	Q8WY98	164 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	HLA-C	Q95604	372 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TPK1	Q9H3S4	243 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	AKTIP	Q9H8T0	292 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	DNAJB9	Q9UBS3	223 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	AKAP12	Q02952	1782 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	FAM25E	A8MYX2	175 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532		M0QZQ0	153 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	RLN1	P04808	185 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	SDC2	P34741	201 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	GJA5	P36382	358 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	DPP6	P42658	865 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CHERP	Q8IWX8	916 aa	Known RBP	15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PARP8	Q8N3A8	854 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	METTL27	Q8N6F8	245 aa	Predicted RBP	15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ANKFN1	Q8N957	763 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MOAP1	Q96BY2	351 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	HHIPL1	Q96JK4	782 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MS4A4A	Q96JQ5	239 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	RMI1	Q9H9A7	625 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	FAM149A	A5PLN7	773 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TMEM25	Q86YD3	366 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ABCB10	Q9NRK6	738 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	C9	P02748	559 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CDK6	Q00534	326 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MC1R	Q01726	317 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ZNF542P	Q5EBM4	170 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CEACAM20	Q6UY09	585 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	C2CD4A	Q8NCU7	369 aa	Predicted RBP	15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PEBP4	Q96S96	227 aa		15.25	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PSIP1	O75475	530 aa	Known RBP	15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TNFRSF21	O75509	655 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	GANAB	Q14697	944 aa	Known RBP	15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	OLFML2A	Q68BL7	652 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ALG1L	Q6GMV1	187 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	AHSA2	Q719I0	299 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	SETD6	Q8TBK2	473 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	HAVCR1	Q96D42	359 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TMEM59L	Q9UK28	342 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CLEC4A	Q9UMR7	237 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	DLGAP4	Q9Y2H0	992 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	FAM170B	A6NMN3	283 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	FOXO6	A8MYZ6	492 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PDCD5	O14737	125 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	DLX3	O60479	287 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CST5	P28325	142 aa	Predicted RBP	15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	HOXD13	P35453	343 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	RAB28	P51157	221 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	RPS6KA3	P51812	740 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	KIAA0319	Q5VV43	1072 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	USP30	Q70CQ3	517 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	GPRIN1	Q7Z2K8	1008 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	LRRC17	Q8N6Y2	441 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PNLDC1	Q8NA58	520 aa	Known RBP	15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	POC5	Q8NA72	575 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	RHBDD1	Q8TEB9	315 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	AXIN1	O15169	862 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	RNH1	P13489	461 aa	Known RBP	15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	HNRNPA2B1	P22626	353 aa	Known RBP	15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	OR4D2	P58180	307 aa		15.24	■□□□□ 0.03

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms