RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897		A0A075B6Q4	140 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	KRT87P	A6NCN2	255 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	TTC36	A6NLP5	189 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	MAN1A2	O60476	641 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	LILRB3	O75022	631 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	OXSR1	O95747	527 aa	Predicted RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	PTH	P01270	115 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	RHOC	P08134	193 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	SLC10A3	P09131	477 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	HLA-E	P13747	358 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	FRK	P42685	505 aa	Predicted RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	DCDC1	P59894	354 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	SEMG2	Q02383	582 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	CRHR2	Q13324	411 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	FZD5	Q13467	585 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	EIF4H	Q15056	248 aa	Known RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	RGN	Q15493	299 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	DGUOK	Q16854	277 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	GLYR1	Q49A26	553 aa	Predicted RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	SLC25A30	Q5SVS4	291 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ATAD3B	Q5T9A4	648 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	LHX8	Q68G74	356 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	GLB1L	Q6UWU2	654 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	CCDC149	Q6ZUS6	474 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	CLECL1	Q8IZS7	167 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	TMEM132C	Q8N3T6	1108 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	CPXM2	Q8N436	756 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	SVOP	Q8N4V2	548 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	CLHC1	Q8NHS4	586 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	FAM162A	Q96A26	154 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	RMDN1	Q96DB5	314 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	SCRN2	Q96FV2	425 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	DPH2	Q9BQC3	489 aa	Predicted RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ZNF717	Q9BY31	904 aa	Predicted RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	REXO4	Q9GZR2	422 aa	Known RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	PRDM8	Q9NQV8	689 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	POLE4	Q9NR33	117 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ASAH2	Q9NR71	780 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ACER3	Q9NUN7	267 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	PAIP2B	Q9ULR5	123 aa	Known RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	IFT52	Q9Y366	437 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	GPC6	Q9Y625	555 aa	Predicted RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897		U3KQV3	271 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	DNAH14	Q0VDD8	3507 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897		A0A0B4J293	547 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	GABRR3	A8MPY1	467 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	EFCAB9	A8MZ26	197 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	WASH3P	C4AMC7	463 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	CLIC1	O00299	241 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	RNASET2	O00584	256 aa	Known RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	STX7	O15400	261 aa	Known RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	SCO2	O43819	266 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	NADK	O95544	446 aa	Predicted RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	LINC00271	P0C7V0	271 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	EPB42	P16452	691 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	CD36	P16671	472 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ZNF7	P17097	686 aa	Predicted RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ITGB6	P18564	788 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	PRPS1L1	P21108	318 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ALDH4A1	P30038	563 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	CSK	P41240	450 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	TM4SF4	P48230	202 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	RGS6	P49758	472 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	NEK2	P51955	445 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	SELENOW	P63302	87 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	SOWAHC	Q53LP3	525 aa	Predicted RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	MPP7	Q5T2T1	576 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	CACHD1	Q5VU97	1274 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	LIPJ	Q5W064	366 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ZNF852	Q6ZMS4	543 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ANKRD46	Q86W74	232 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	TMC8	Q8IU68	726 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	METTL4	Q8N3J2	472 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	TCAIM	Q8N3R3	496 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	OR56A3	Q8NH54	315 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	GIPC2	Q8TF65	315 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	RNF31	Q96EP0	1072 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ZNF649	Q9BS31	505 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	CENPO	Q9BU64	300 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	THUMPD3	Q9BV44	507 aa	Known RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	YIPF2	Q9BWQ6	316 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	EMILIN2	Q9BXX0	1053 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	CPEB1	Q9BZB8	566 aa	Known RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	SIAE	Q9HAT2	523 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ZFYVE1	Q9HBF4	777 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	TMEM165	Q9HC07	324 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	ZDHHC3	Q9NYG2	299 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	TPRKB	Q9Y3C4	175 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	PCDHB9	Q9Y5E1	797 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	MYOF	Q9NZM1	2061 aa		4.26	□□□□□ -1.73
CTSC-208	ENST00000533897	GLYATL1P3	A0A0U1RQE8	302 aa		4.25	□□□□□ -1.73
CTSC-208	ENST00000533897	CAPN5	O15484	640 aa	Predicted RBP	4.25	□□□□□ -1.73
CTSC-208	ENST00000533897	SPINT1	O43278	529 aa		4.25	□□□□□ -1.73
CTSC-208	ENST00000533897	DIRAS1	O95057	198 aa		4.25	□□□□□ -1.73
CTSC-208	ENST00000533897	FADS2	O95864	444 aa	Known RBP	4.25	□□□□□ -1.73
CTSC-208	ENST00000533897	HLA-DQB1	P01920	261 aa		4.25	□□□□□ -1.73
CTSC-208	ENST00000533897	GSN	P06396	782 aa		4.25	□□□□□ -1.73
CTSC-208	ENST00000533897	C8G	P07360	202 aa		4.25	□□□□□ -1.73
CTSC-208	ENST00000533897	GAA	P10253	952 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms