RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 SARGQ9BW04 601 aa25.06■■□□□ 1.6
TSPAN4-217ENST00000527644 TSPYL1Q9H0U9 437 aa25.06■■□□□ 1.6
TSPAN4-217ENST00000527644 LCMT2O60294 686 aaKnown RBP25.05■■□□□ 1.6
TSPAN4-217ENST00000527644 FAM155BO75949 473 aa25.05■■□□□ 1.6
TSPAN4-217ENST00000527644 CASRP41180 1078 aa25.05■■□□□ 1.6
TSPAN4-217ENST00000527644 ATP6V0D1P61421 351 aa25.05■■□□□ 1.6
TSPAN4-217ENST00000527644 KLC1Q07866 573 aa25.05■■□□□ 1.6
TSPAN4-217ENST00000527644 CSHL1Q14406 222 aa25.05■■□□□ 1.6
TSPAN4-217ENST00000527644 ASPGQ86U10 573 aa25.05■■□□□ 1.6
TSPAN4-217ENST00000527644 RELL1Q8IUW5 271 aa25.05■■□□□ 1.6
TSPAN4-217ENST00000527644 TBC1D19Q8N5T2 526 aa25.05■■□□□ 1.6
TSPAN4-217ENST00000527644 TEX19Q8NA77 164 aa25.05■■□□□ 1.6
TSPAN4-217ENST00000527644 SLC5A11Q8WWX8 675 aa25.05■■□□□ 1.6
TSPAN4-217ENST00000527644 NEIL2Q969S2 332 aa25.05■■□□□ 1.6
TSPAN4-217ENST00000527644 VPS50Q96JG6 964 aa25.05■■□□□ 1.6
TSPAN4-217ENST00000527644 TRPC4Q9UBN4 977 aa25.05■■□□□ 1.6
TSPAN4-217ENST00000527644 DYRK1BQ9Y463 629 aa25.05■■□□□ 1.6
TSPAN4-217ENST00000527644 ZNF451Q9Y4E5 1061 aa25.05■■□□□ 1.6
TSPAN4-217ENST00000527644 A0A0A6YYC8 382 aaPredicted RBP25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 A6NL46 340 aa25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 I3L1I5 382 aaPredicted RBP25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 STATHP02808 62 aa25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 AVPR1BP47901 424 aa25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 TGFBIQ15582 683 aa25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 VWA2Q5GFL6 755 aa25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 SPATA6LQ8N4H0 392 aa25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 AMER3Q8N944 861 aa25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 SLC13A3Q8WWT9 602 aa25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 RHBDF1Q96CC6 855 aa25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 UBXN10Q96LJ8 280 aa25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 CRB3Q9BUF7 120 aa25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 YIPF2Q9BWQ6 316 aa25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 MKKSQ9NPJ1 570 aaPredicted RBP25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 ATP13A2Q9NQ11 1180 aa25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 GPR83Q9NYM4 423 aa25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 SLC22A14Q9Y267 594 aa25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 MAP4K5Q9Y4K4 846 aa25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 HS3ST3B1Q9Y662 390 aa25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 KCNE2Q9Y6J6 123 aa25.04■■□□□ 1.6
TSPAN4-217ENST00000527644 TRBC2A0A5B9 178 aa25.03■■□□□ 1.6
TSPAN4-217ENST00000527644 SOCS6O14544 535 aa25.03■■□□□ 1.6
TSPAN4-217ENST00000527644 CD1DP15813 335 aa25.03■■□□□ 1.6
TSPAN4-217ENST00000527644 PHBP35232 272 aa25.03■■□□□ 1.6
TSPAN4-217ENST00000527644 RBBP7Q16576 425 aa25.03■■□□□ 1.6
TSPAN4-217ENST00000527644 CDKL4Q5MAI5 379 aa25.03■■□□□ 1.6
TSPAN4-217ENST00000527644 CATSPEREQ5SY80 951 aa25.03■■□□□ 1.6
TSPAN4-217ENST00000527644 TMEM214Q6NUQ4 689 aaKnown RBP25.03■■□□□ 1.6
TSPAN4-217ENST00000527644 IFT81Q8WYA0 676 aa25.03■■□□□ 1.6
TSPAN4-217ENST00000527644 NUDT9Q9BW91 350 aa25.03■■□□□ 1.6
TSPAN4-217ENST00000527644 UNKQ9C0B0 810 aaKnown RBP25.03■■□□□ 1.6
TSPAN4-217ENST00000527644 TGIF2Q9GZN2 237 aa25.03■■□□□ 1.6
TSPAN4-217ENST00000527644 PELI2Q9HAT8 420 aa25.03■■□□□ 1.6
TSPAN4-217ENST00000527644 C14orf105Q9NVL8 296 aa25.03■■□□□ 1.6
TSPAN4-217ENST00000527644 MRPS2Q9Y399 296 aaKnown RBP25.03■■□□□ 1.6
TSPAN4-217ENST00000527644 H0YIG0 161 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 OR1F1O43749 312 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 KLHL41O60662 606 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 NSA2O95478 260 aaKnown RBP25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 SLC35G6P0C7Q6 338 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 CRABP2P29373 138 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 SOX8P57073 446 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 MEF2AQ02078 507 aaPredicted RBP25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 SLMAPQ14BN4 828 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 EFTUD2Q15029 972 aaKnown RBP eCLIP25.02■■□□□ 1.61e-6■■■■□ 19.4
TSPAN4-217ENST00000527644 KIRREL2Q6UWL6 708 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 RAPH1Q70E73 1250 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 GPSM1Q86YR5 675 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 HPS6Q86YV9 775 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 KLHDC8AQ8IYD2 350 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 PRSS58Q8IYP2 241 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 TCAIMQ8N3R3 496 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 GALNT16Q8N428 558 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 CEP112Q8N8E3 955 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 TSNARE1Q96NA8 513 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 CYTH2Q99418 400 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 SMAD5Q99717 465 aaKnown RBP25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 MACROD1Q9BQ69 325 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 NINJ2Q9NZG7 142 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 C3orf18Q9UK00 162 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 FBXL4Q9UKA2 621 aa25.02■■□□□ 1.6
TSPAN4-217ENST00000527644 SLC6A12P48065 614 aa25.01■■□□□ 1.59
TSPAN4-217ENST00000527644 AIMP2Q13155 320 aaKnown RBP25.01■■□□□ 1.59
TSPAN4-217ENST00000527644 PWP1Q13610 501 aa25.01■■□□□ 1.59
TSPAN4-217ENST00000527644 NXPE4Q6UWF7 544 aa25.01■■□□□ 1.59
TSPAN4-217ENST00000527644 OR9A4Q8NGU2 314 aa25.01■■□□□ 1.59
TSPAN4-217ENST00000527644 KIAA1191Q96A73 305 aa25.01■■□□□ 1.59
TSPAN4-217ENST00000527644 FMO2Q99518 471 aa25.01■■□□□ 1.59
TSPAN4-217ENST00000527644 EPN3Q9H201 632 aa25.01■■□□□ 1.59
TSPAN4-217ENST00000527644 NCF1BA6NI72 391 aaPredicted RBP25■■□□□ 1.59
TSPAN4-217ENST00000527644 NCF1CA8MVU1 366 aaPredicted RBP25■■□□□ 1.59
TSPAN4-217ENST00000527644 NCF1P14598 390 aaPredicted RBP25■■□□□ 1.59
TSPAN4-217ENST00000527644 EMP2P54851 167 aa25■■□□□ 1.59
TSPAN4-217ENST00000527644 SNRPNP63162 240 aaKnown RBP25■■□□□ 1.59
TSPAN4-217ENST00000527644 TLE1Q04724 770 aa25■■□□□ 1.59
TSPAN4-217ENST00000527644 MYBPC3Q14896 1274 aa25■■□□□ 1.59
TSPAN4-217ENST00000527644 CMC1Q7Z7K0 106 aa25■■□□□ 1.59
TSPAN4-217ENST00000527644 LAPTM4BQ86VI4 370 aa25■■□□□ 1.59
TSPAN4-217ENST00000527644 KCT2Q8NC54 265 aa25■■□□□ 1.59
TSPAN4-217ENST00000527644 ZNF740Q8NDX6 193 aa25■■□□□ 1.59
TSPAN4-217ENST00000527644 OR11G2Q8NGC1 345 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms