RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, human

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-215	ENST00000522963	REEP5	Q00765	189 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	GALNT1	Q10472	559 aa	Predicted RBP	11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	SLBP	Q14493	270 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	TBCC	Q15814	346 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	TMEM164	Q5U3C3	297 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	TTC19	Q6DKK2	380 aa	Predicted RBP	11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	C19orf48	Q6RUI8	117 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	GPRIN3	Q6ZVF9	776 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	ADCK2	Q7Z695	626 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	MILR1	Q7Z6M3	343 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	CUZD1	Q86UP6	607 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	C19orf47	Q8N9M1	422 aa	Known RBP	11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	L3MBTL4	Q8NA19	623 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	ZNF740	Q8NDX6	193 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	LRRC8C	Q8TDW0	803 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	PMEPA1	Q969W9	287 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	PTCD3	Q96EY7	689 aa	Known RBP	11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	TAAR9	Q96RI9	348 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	SORT1	Q99523	831 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	EHD1	Q9H4M9	534 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	MID1IP1	Q9NPA3	183 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	FOXJ2	Q9P0K8	574 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	ANKMY1	Q9P2S6	941 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	SNX7	Q9UNH6	387 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	STK38L	Q9Y2H1	464 aa		11.43	□□□□□ -0.58
PVT1-215	ENST00000522963	EPG5	Q9HCE0	2579 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	FEZF1	A0PJY2	475 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	CDRT15L2	A8MXV6	281 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	C9orf172	C9J069	976 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	HAT1	O14929	419 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	UGDH	O60701	494 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	CTSV	O60911	334 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	CLDN9	O95484	217 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	ESRRB	O95718	433 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	FOXA1	P55317	472 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	OCRL	Q01968	901 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	KCNAB1	Q14722	419 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	NAA25	Q14CX7	972 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	GGTA1P	Q4G0N0	100 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	LIPJ	Q5W064	366 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	GRHL2	Q6ISB3	625 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	FBXO42	Q6P3S6	717 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	RGS9BP	Q6ZS82	235 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	ZFAND4	Q86XD8	727 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	MYLK4	Q86YV6	388 aa	Predicted RBP	11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	PLD3	Q8IV08	490 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	CARF	Q8N187	725 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	ZNF248	Q8NDW4	579 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	KCNE4	Q8WWG9	221 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	KLHL6	Q8WZ60	621 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	ZUFSP	Q96AP4	578 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	SLC41A2	Q96JW4	573 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	KCNA7	Q96RP8	456 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	AIF1L	Q9BQI0	150 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	EFCAB11	Q9BUY7	163 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	SYNPO2L	Q9H987	977 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	EML4	Q9HC35	981 aa	Known RBP	11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	APMAP	Q9HDC9	416 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	FAM60A	Q9NP50	221 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	THAP1	Q9NVV9	213 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	SOHLH2	Q9NX45	425 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	TRPS1	Q9UHF7	1281 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	ZDHHC2	Q9UIJ5	367 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	PILRA	Q9UKJ1	303 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	B3GALT1	Q9Y5Z6	326 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	SNRNP200	O75643	2136 aa	Known RBP	11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	SPTB	P11277	2137 aa		11.42	□□□□□ -0.58
PVT1-215	ENST00000522963	SDK2	Q58EX2	2172 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	TCP11X1	B4DZS4	312 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	TOX3	O15405	576 aa	Predicted RBP	11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	KLK10	O43240	276 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	LCMT2	O60294	686 aa	Known RBP	11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	ZBTB11	O95625	1053 aa	Predicted RBP	11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	CAPN1	P07384	714 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	ANKRD34C	P0C6C1	535 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	EZR	P15311	586 aa	Known RBP	11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	ITPKB	P27987	946 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	BCL6	P41182	706 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	HNF4A	P41235	474 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	MLLT3	P42568	568 aa	Predicted RBP	11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	SCTR	P47872	440 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	LAPTM5	Q13571	262 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	CPSF6	Q16630	551 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	TCHHL1	Q5QJ38	904 aa	Predicted RBP	11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	SH2D4B	Q5SQS7	431 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	DCAF12	Q5T6F0	453 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	IGF2-AS	Q6U949	168 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	RNF44	Q7L0R7	432 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	KRT78	Q8N1N4	520 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	DNAJC22	Q8N4W6	341 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	ZNF781	Q8N8C0	355 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	CDYL2	Q8N8U2	506 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	SNIP1	Q8TAD8	396 aa	Known RBP	11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	TCTN2	Q96GX1	697 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	FCRL4	Q96PJ5	515 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	OR6C1	Q96RD1	312 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	ZNF768	Q9H5H4	540 aa	Known RBP	11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	CCDC134	Q9H6E4	229 aa		11.41	□□□□□ -0.58
PVT1-215	ENST00000522963	SLCO1B3	Q9NPD5	702 aa		11.41	□□□□□ -0.58

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