RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 FUT8Q9BYC5 575 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 ZNF71Q9NQZ8 489 aaPredicted RBP18.91■□□□□ 0.62
SFXN1-209ENST00000508290 GPR83Q9NYM4 423 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 SLC22A7Q9Y694 548 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 MAU2Q9Y6X3 613 aa18.91■□□□□ 0.62
SFXN1-209ENST00000508290 J3QKU1 62 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 PHGDHO43175 533 aaKnown RBP18.9■□□□□ 0.62
SFXN1-209ENST00000508290 ZGLP1P0C6A0 271 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 GNAZP19086 355 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 CXCR2P25025 360 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 GSTM2P28161 218 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 AHRP35869 848 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 SLMAPQ14BN4 828 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 ZXDCQ2QGD7 858 aaPredicted RBP18.9■□□□□ 0.62
SFXN1-209ENST00000508290 FAM69BQ5VUD6 431 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 RAPH1Q70E73 1250 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 GPSM1Q86YR5 675 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 PLD3Q8IV08 490 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 METTL27Q8N6F8 245 aaPredicted RBP18.9■□□□□ 0.62
SFXN1-209ENST00000508290 STAG3L4Q8TBR4 150 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 SLC13A3Q8WWT9 602 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 NEIL2Q969S2 332 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 KIAA1191Q96A73 305 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 MMABQ96EY8 250 aaPredicted RBP18.9■□□□□ 0.62
SFXN1-209ENST00000508290 SEC16BQ96JE7 1060 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 OR4K3Q96R72 315 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 AIF1LQ9BQI0 150 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 PITHD1Q9GZP4 211 aaPredicted RBP18.9■□□□□ 0.62
SFXN1-209ENST00000508290 ACSS3Q9H6R3 686 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 CAB39LQ9H9S4 337 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 NMRAL1Q9HBL8 299 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 ATP13A2Q9NQ11 1180 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 GPRC5BQ9NZH0 403 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 C5AR2Q9P296 337 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 TRPC4Q9UBN4 977 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 DMGDHQ9UI17 866 aaKnown RBP18.9■□□□□ 0.62
SFXN1-209ENST00000508290 IKZF3Q9UKT9 509 aa18.9■□□□□ 0.62
SFXN1-209ENST00000508290 FASNP49327 2511 aaKnown RBP18.89■□□□□ 0.61
SFXN1-209ENST00000508290 P2RX6O15547 441 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 DNAJB5O75953 348 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 MED26O95402 600 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 CD1DP15813 335 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 GGT5P36269 586 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 CASRP41180 1078 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 BCL6P41182 706 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 SLC6A12P48065 614 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 AIMP2Q13155 320 aaKnown RBP18.89■□□□□ 0.61
SFXN1-209ENST00000508290 HERC3Q15034 1050 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 RBBP7Q16576 425 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 SULT1C3Q6IMI6 304 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 TMEM214Q6NUQ4 689 aaKnown RBP18.89■□□□□ 0.61
SFXN1-209ENST00000508290 TAOK1Q7L7X3 1001 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 TEX19Q8NA77 164 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.89■□□□□ 0.61
SFXN1-209ENST00000508290 IFT81Q8WYA0 676 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 RHBDF1Q96CC6 855 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 CLK4Q9HAZ1 481 aaKnown RBP18.89■□□□□ 0.61
SFXN1-209ENST00000508290 ANKHQ9HCJ1 492 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 ZFP69BQ9UJL9 534 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 SH2B3Q9UQQ2 575 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 SLC22A14Q9Y267 594 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 HS3ST3B1Q9Y662 390 aa18.89■□□□□ 0.61
SFXN1-209ENST00000508290 A0A087X1B8 175 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 URADA6NGE7 173 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 FOXS1O43638 330 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 S100BP04271 92 aaPredicted RBP18.88■□□□□ 0.61
SFXN1-209ENST00000508290 IL10P22301 178 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 HPDP32754 393 aaPredicted RBP18.88■□□□□ 0.61
SFXN1-209ENST00000508290 KLC1Q07866 573 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 RGS1Q08116 209 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 CHAF1BQ13112 559 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 MYBPC3Q14896 1274 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 TUBB8Q3ZCM7 444 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 VWA5B1Q5TIE3 1220 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 IRAK1BP1Q5VVH5 260 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 NXPE4Q6UWF7 544 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 IFT20Q8IY31 132 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 GALNT16Q8N428 558 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 AMER3Q8N944 861 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 PDPRQ8NCN5 879 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 TRPV3Q8NET8 790 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 TTLQ8NG68 377 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 TM9SF4Q92544 642 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 SMAD5Q99717 465 aaKnown RBP18.88■□□□□ 0.61
SFXN1-209ENST00000508290 EHD1Q9H4M9 534 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 SOX17Q9H6I2 414 aaPredicted RBP18.88■□□□□ 0.61
SFXN1-209ENST00000508290 SYNPO2LQ9H987 977 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 NINJ2Q9NZG7 142 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 ACOT9Q9Y305 439 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 BOD1L1Q8NFC6 3051 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 PCM1Q15154 2024 aa18.88■□□□□ 0.61
SFXN1-209ENST00000508290 A0A0A6YYC8 382 aaPredicted RBP18.87■□□□□ 0.61
SFXN1-209ENST00000508290 A0A1W2PQ72 361 aa18.87■□□□□ 0.61
SFXN1-209ENST00000508290 FER1L5A0AVI2 2057 aa18.87■□□□□ 0.61
SFXN1-209ENST00000508290 I3L1I5 382 aaPredicted RBP18.87■□□□□ 0.61
SFXN1-209ENST00000508290 OR1F1O43749 312 aa18.87■□□□□ 0.61
SFXN1-209ENST00000508290 DPM1O60762 260 aa18.87■□□□□ 0.61
SFXN1-209ENST00000508290 H2AFYO75367 372 aaKnown RBP18.87■□□□□ 0.61
SFXN1-209ENST00000508290 WDR47O94967 919 aa18.87■□□□□ 0.61
SFXN1-209ENST00000508290 SLC35E2BP0CK96 405 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms