RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 CD19P15391 556 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 NCK1P16333 377 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 HPCAL1P37235 193 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 KCNJ1P48048 391 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 SNAPC2Q13487 334 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 SSPNQ14714 243 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 NR1I3Q14994 352 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 PCBP2Q15366 365 aaKnown RBP eCLIP6.08□□□□□ -1.443e-6■■■■□ 25.7
CLCN3-204ENST00000504131 EPHA10Q5JZY3 1008 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 LDLRAD1Q5T700 205 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 GLT6D1Q7Z4J2 308 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 FAM98AQ8NCA5 519 aaKnown RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 TMEM40Q8WWA1 233 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 HYLS1Q96M11 299 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 OSMRQ99650 979 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 ADAM7Q9H2U9 754 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 LIMD1Q9UGP4 676 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 C19orf53Q9UNZ5 99 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 KPTNQ9Y664 436 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 WDR17Q8IZU2 1322 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 J3QR89 54 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 MASP2O00187 686 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 ADAP1O75689 374 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 TYMPP19971 482 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 MPSTP25325 297 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 ACOT2P49753 483 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 UBXN2BQ14CS0 331 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 XKR6Q5GH73 641 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 HTR3DQ70Z44 454 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 MTSS1LQ765P7 747 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF438Q7Z4V0 828 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 NRMQ8IXM6 262 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 ZBTB8AQ96BR9 441 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 GLT1D1Q96MS3 346 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 OR2M2Q96R28 347 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 PTPN18Q99952 460 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 MXRA8Q9BRK3 442 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 ABCC13Q9NSE7 274 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 PLCXD1Q9NUJ7 323 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 TMEM9Q9P0T7 183 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 PITPNC1Q9UKF7 332 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 SPATA31A3Q5VYP0 1347 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 ELOA3CA0A087WX78 387 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 FAM240BA0A1B0GVZ2 78 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 ELOA3DA6NLF2 546 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 PDCD5O14737 125 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 SLC16A3O15427 465 aaKnown RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 CHST10O43529 356 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 RBBP9O75884 186 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 MATN4O95460 622 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 COX5BP10606 129 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 C5AR1P21730 350 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 RPL4P36578 427 aaKnown RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 SLC11A2P49281 568 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 DCDC1P59894 354 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 NCS1P62166 190 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 ITPK1Q13572 414 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 FAM69BQ5VUD6 431 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 SH3RF1Q7Z6J0 888 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 PPIL6Q8IXY8 311 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 TSEN2Q8NCE0 465 aaKnown RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 OR5L1Q8NGL2 311 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 BRIX1Q8TDN6 353 aaKnown RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 ELP5Q8TE02 316 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 SERINC2Q96SA4 455 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF2Q9BSG1 426 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 ASPNQ9BXN1 380 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 TMPRSS5Q9H3S3 457 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 DPEP2Q9H4A9 486 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 RPF1Q9H9Y2 349 aaKnown RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 CNOT8Q9UFF9 292 aaKnown RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 ANGPT4Q9Y264 503 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 BCS1LQ9Y276 419 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 VWA7Q9Y334 891 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 IQCMA0A1B0GVH7 501 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 TMEM72A0PK05 275 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 PRAMEF22A3QJZ6 481 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 F8VP50 259 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 MAGEB4O15481 346 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 HTRA2O43464 458 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 RNASEH1O60930 286 aaKnown RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 GGCTO75223 188 aaKnown RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 RPP40O75818 363 aaKnown RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 LATS1O95835 1130 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 CRYABP02511 175 aaKnown RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 PHKG2P15735 406 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 CERS1P27544 350 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 CCND3P30281 292 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 CCR7P32248 378 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 DSG3P32926 999 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 STK19P49842 368 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 OGDHQ02218 1023 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 NDUFAF6Q330K2 333 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 PDZD9Q8IXQ8 264 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 ZCCHC10Q8TBK6 192 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 HLA-CQ95604 372 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 ZDHHC15Q96MV8 337 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 SEMA3CQ99985 751 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 NKX6-2Q9C056 277 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 WWTR1Q9GZV5 400 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms