RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 AGBL4Q5VU57 503 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 CAPRIN2Q6IMN6 1127 aaKnown RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 ANO7Q6IWH7 933 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 TMEM214Q6NUQ4 689 aaKnown RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 SUSD1Q6UWL2 747 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 DNAJC14Q6Y2X3 702 aaPredicted RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 IKBIPQ70UQ0 350 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 TRIM74Q86UV6 250 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 RALGPS2Q86X27 583 aaPredicted RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 SPPL2CQ8IUH8 684 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 MICU2Q8IYU8 434 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 MARVELD2Q8N4S9 558 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 DENND6BQ8NEG7 585 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 TTLQ8NG68 377 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 OR5K2Q8NHB8 316 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 OR14C36Q8NHC7 312 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 CLHC1Q8NHS4 586 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 ZNF480Q8WV37 535 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 CANT1Q8WVQ1 401 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 LRTOMTQ8WZ04 291 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 SMPDL3AQ92484 453 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 FIG4Q92562 907 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 TFGQ92734 400 aaPredicted RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 GTF2H4Q92759 462 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 DNASE1L2Q92874 299 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 MTERF3Q96E29 417 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 WDR34Q96EX3 536 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 CENPNQ96H22 339 aaPredicted RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 FCRL1Q96LA6 429 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 TEX37Q96LM6 180 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 PANX1Q96RD7 426 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 MYCBPQ99417 103 aaPredicted RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 SGPP1Q9BX95 441 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 EBPLQ9BY08 206 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 FAM192AQ9GZU8 254 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 OSGEPL1Q9H4B0 414 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 SLC52A3Q9NQ40 469 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 INTS7Q9NVH2 962 aaKnown RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 SPATA6Q9NWH7 488 aaPredicted RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 FBXL12Q9NXK8 326 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 NDUFA13Q9P0J0 144 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 SCHIP1Q9P0W5 487 aaPredicted RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 DLGAP2Q9P1A6 1054 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 ZNF282Q9UDV7 671 aaPredicted RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 MOSPD1Q9UJG1 213 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 RPS6KA6Q9UK32 745 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 BAG5Q9UL15 447 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 FZD4Q9ULV1 537 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 PPT2Q9UMR5 302 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 VPS4AQ9UN37 437 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 SAMD4AQ9UPU9 718 aaKnown RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 TSC22D4Q9Y3Q8 395 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 ORC6Q9Y5N6 252 aa6.68□□□□□ -1.34
USP39-219ENST00000496047 ARHGEF17Q96PE2 2063 aaPredicted RBP6.68□□□□□ -1.34
USP39-219ENST00000496047 CHD8Q9HCK8 2581 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 OTOL1A6NHN0 477 aaPredicted RBP6.67□□□□□ -1.34
USP39-219ENST00000496047 LRRC72A6NJI9 287 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 MAGEB17A8MXT2 336 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 PLK4O00444 970 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 CXCR6O00574 342 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 TOR1BO14657 336 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 SCAMP2O15127 329 aaKnown RBP6.67□□□□□ -1.34
USP39-219ENST00000496047 LINC01565O15544 149 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 RNGTTO60942 597 aaKnown RBP6.67□□□□□ -1.34
USP39-219ENST00000496047 LILRB5O75023 590 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 LYNP07948 512 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 RETP07949 1114 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 ANXA4P09525 319 aaPredicted RBP6.67□□□□□ -1.34
USP39-219ENST00000496047 UBTFL6P0CB48 400 aaPredicted RBP6.67□□□□□ -1.34
USP39-219ENST00000496047 BMP2P12643 396 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 ZNF23P17027 643 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 IDSP22304 550 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 PTX3P26022 381 aaPredicted RBP6.67□□□□□ -1.34
USP39-219ENST00000496047 HTR1BP28222 390 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 PDHA2P29803 388 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 DRD3P35462 400 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 ZFP36L2P47974 494 aaKnown RBP6.67□□□□□ -1.34
USP39-219ENST00000496047 NEK2P51955 445 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 ARHGDIAP52565 204 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 MTPNP58546 118 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 DMPKQ09013 629 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 SUZ12Q15022 739 aaKnown RBP6.67□□□□□ -1.34
USP39-219ENST00000496047 ATP6AP1Q15904 470 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 RUNDC3AQ59EK9 446 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 TMEM31Q5JXX7 168 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 CPTPQ5TA50 214 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 NXPE4Q6UWF7 544 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 PARM1Q6UWI2 310 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 DLEU7Q6UYE1 221 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 USP30Q70CQ3 517 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 HORMAD1Q86X24 394 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 CACUL1Q86Y37 369 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 ADHFE1Q8IWW8 467 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 KBTBD2Q8IY47 623 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 LAS2Q8IYD9 372 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 KIAA2013Q8IYS2 634 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 EID3Q8N140 333 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 SVOPLQ8N434 492 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 GALNT4Q8N4A0 578 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 C1orf52Q8N6N3 182 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms