RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 TGIF2Q9GZN2 237 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 VN1R1Q9GZP7 353 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 TSPAN10Q9H1Z9 355 aaPredicted RBP11.96□□□□□ -0.49
SKA1-205ENST00000494518 LZTFL1Q9NQ48 299 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 KLHL1Q9NR64 748 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 ANKRD10Q9NXR5 420 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 UTP6Q9NYH9 597 aaKnown RBP11.96□□□□□ -0.49
SKA1-205ENST00000494518 SUCOQ9UBS9 1254 aaKnown RBP11.96□□□□□ -0.49
SKA1-205ENST00000494518 SH2B3Q9UQQ2 575 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 ADGRG4Q8IZF6 3080 aa11.96□□□□□ -0.5
SKA1-205ENST00000494518 FEZF1A0PJY2 475 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 ZNF839A8K0R7 811 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 FAM227AF5H4B4 570 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 SGK494L7N484 410 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 ZNHIT1O43257 154 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 PRAMEF2O60811 474 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 PAMP19021 973 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 IMPA1P29218 277 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 ADARP55265 1226 aaKnown RBP11.95□□□□□ -0.5
SKA1-205ENST00000494518 MPP1Q00013 466 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 THOC5Q13769 683 aaKnown RBP11.95□□□□□ -0.5
SKA1-205ENST00000494518 NDUFA9Q16795 377 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 BTBD16Q32M84 506 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 ZNF766Q5HY98 468 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 DRICH1Q6PGQ1 229 aaPredicted RBP11.95□□□□□ -0.5
SKA1-205ENST00000494518 C4orf22Q6V702 233 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 MBOAT1Q6ZNC8 495 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 UBE2R2Q712K3 238 aaPredicted RBP11.95□□□□□ -0.5
SKA1-205ENST00000494518 VN1R4Q7Z5H5 301 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 CPEB2Q7Z5Q1 589 aaKnown RBP11.95□□□□□ -0.5
SKA1-205ENST00000494518 MRGPRGQ86SM5 289 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 CAND1Q86VP6 1230 aaKnown RBP11.95□□□□□ -0.5
SKA1-205ENST00000494518 LRRC56Q8IYG6 542 aaPredicted RBP11.95□□□□□ -0.5
SKA1-205ENST00000494518 BEST3Q8N1M1 668 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 OR51Q1Q8NH59 317 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 CCDC138Q96M89 665 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 GPR21Q99679 349 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 TUBB6Q9BUF5 446 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 CCDC68Q9H2F9 335 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 INTS10Q9NVR2 710 aaKnown RBP11.95□□□□□ -0.5
SKA1-205ENST00000494518 STMN3Q9NZ72 180 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 SAMD15Q9P1V8 674 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 ABI3Q9P2A4 366 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 MED16Q9Y2X0 877 aa11.95□□□□□ -0.5
SKA1-205ENST00000494518 ZNF860A6NHJ4 632 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 TXNDC9O14530 226 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 KIF5CO60282 957 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 MAN1A2O60476 641 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 RDH16O75452 317 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 CDC123O75794 336 aaPredicted RBP11.94□□□□□ -0.5
SKA1-205ENST00000494518 CRYABP02511 175 aaKnown RBP11.94□□□□□ -0.5
SKA1-205ENST00000494518 HTR1EP28566 365 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 HSD17B2P37059 387 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 COILP38432 576 aaPredicted RBP11.94□□□□□ -0.5
SKA1-205ENST00000494518 SLC1A2P43004 574 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 CA7P43166 264 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 XCR1P46094 333 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 TBPL1P62380 186 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 ABATP80404 500 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 CD200R1Q8TD46 325 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 ASB11Q8WXH4 323 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 MOCOSQ96EN8 888 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 SIGLEC12Q96PQ1 595 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 CYTH2Q99418 400 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 RNF32Q9H0A6 362 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 KCNK13Q9HB14 408 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 CCDC177Q9NQR7 707 aaPredicted RBP11.94□□□□□ -0.5
SKA1-205ENST00000494518 TINAGQ9UJW2 476 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 ADAMTS6Q9UKP5 1117 aa11.94□□□□□ -0.5
SKA1-205ENST00000494518 ZBTB14O43829 449 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 NSA2O95478 260 aaKnown RBP11.93□□□□□ -0.5
SKA1-205ENST00000494518 KRT14P02533 472 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 NUDT7P0C024 238 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 MPC1LP0DKB6 136 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 ICAM2P13598 275 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 POU3F2P20265 443 aaPredicted RBP11.93□□□□□ -0.5
SKA1-205ENST00000494518 ELAVL4P26378 380 aaKnown RBP11.93□□□□□ -0.5
SKA1-205ENST00000494518 CDC25BP30305 580 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 BCL6P41182 706 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 SARNPP82979 210 aaKnown RBP11.93□□□□□ -0.5
SKA1-205ENST00000494518 CDK16Q00536 496 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 ART3Q13508 389 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 FAM53BQ14153 422 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 C3AR1Q16581 482 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 LONRF1Q17RB8 773 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 TTC27Q6P3X3 843 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 CYHR1Q6ZMK1 362 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 NCCRP1Q6ZVX7 275 aaPredicted RBP11.93□□□□□ -0.5
SKA1-205ENST00000494518 ANKRD37Q7Z713 158 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 CRLF3Q8IUI8 442 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 KCT2Q8NC54 265 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 DNAJB8Q8NHS0 232 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 MAIP1Q8WWC4 291 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 TSLPQ969D9 159 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 NDNQ99608 321 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 NPAS2Q99743 824 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 EBNA1BP2Q99848 306 aaKnown RBP11.93□□□□□ -0.5
SKA1-205ENST00000494518 ATG10Q9H0Y0 220 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 C20orf96Q9NUD7 363 aaPredicted RBP11.93□□□□□ -0.5
SKA1-205ENST00000494518 C19orf25Q9UFG5 118 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms