RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 TEKT2Q9UIF3 430 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 DHRS7Q9Y394 339 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 TACC2O95359 2948 aa17.42■□□□□ 0.38
HDAC6-231ENST00000488905 KIF5CO60282 957 aa17.42■□□□□ 0.38
HDAC6-231ENST00000488905 PRAMEF2O60811 474 aa17.42■□□□□ 0.38
HDAC6-231ENST00000488905 SEC24DO94855 1032 aaPredicted RBP17.42■□□□□ 0.38
HDAC6-231ENST00000488905 UNC5CO95185 931 aa17.42■□□□□ 0.38
HDAC6-231ENST00000488905 CCDC175P0C221 793 aa17.42■□□□□ 0.38
HDAC6-231ENST00000488905 PRF1P14222 555 aa17.42■□□□□ 0.38
HDAC6-231ENST00000488905 RPS15AP62244 130 aaKnown RBP17.42■□□□□ 0.38
HDAC6-231ENST00000488905 MINDY4Q4G0A6 757 aa17.42■□□□□ 0.38
HDAC6-231ENST00000488905 MFSD4BQ5TF39 518 aa17.42■□□□□ 0.38
HDAC6-231ENST00000488905 CYHR1Q6ZMK1 362 aa17.42■□□□□ 0.38
HDAC6-231ENST00000488905 PIWIL4Q7Z3Z4 852 aaKnown RBP17.42■□□□□ 0.38
HDAC6-231ENST00000488905 SRRM1Q8IYB3 904 aaKnown RBP17.42■□□□□ 0.38
HDAC6-231ENST00000488905 CPNE9Q8IYJ1 553 aa17.42■□□□□ 0.38
HDAC6-231ENST00000488905 SERPINB12Q96P63 405 aa17.42■□□□□ 0.38
HDAC6-231ENST00000488905 SUCOQ9UBS9 1254 aaKnown RBP17.42■□□□□ 0.38
HDAC6-231ENST00000488905 C19orf25Q9UFG5 118 aaPredicted RBP17.42■□□□□ 0.38
HDAC6-231ENST00000488905 COMMD10Q9Y6G5 202 aa17.42■□□□□ 0.38
HDAC6-231ENST00000488905 CELSR1Q9NYQ6 3014 aa17.42■□□□□ 0.38
HDAC6-231ENST00000488905 TRGV8A0A0C4DH27 118 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 IGHV3-20A0A0C4DH32 117 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 MAGEB16A2A368 324 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 SDR42E2A6NKP2 422 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 GOLGA8MH3BSY2 632 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 EIF3FO00303 357 aaPredicted RBP17.41■□□□□ 0.38
HDAC6-231ENST00000488905 KRT14P02533 472 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 IL1RNP18510 177 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 HRH2P25021 359 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 MST1P26927 711 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 XCR1P46094 333 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 NAA30Q147X3 362 aaPredicted RBP17.41■□□□□ 0.38
HDAC6-231ENST00000488905 LONRF1Q17RB8 773 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 PLAG1Q6DJT9 500 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 TTC27Q6P3X3 843 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 CPEB2Q7Z5Q1 589 aaKnown RBP17.41■□□□□ 0.38
HDAC6-231ENST00000488905 LMNTD2Q8IXW0 634 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 MCUQ8NE86 351 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 DNAJB8Q8NHS0 232 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 ITLN2Q8WWU7 325 aaPredicted RBP17.41■□□□□ 0.38
HDAC6-231ENST00000488905 UNKQ9C0B0 810 aaKnown RBP17.41■□□□□ 0.38
HDAC6-231ENST00000488905 TMEM184CQ9NVA4 438 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 HCN3Q9P1Z3 774 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 GTF3C1Q12789 2109 aa17.41■□□□□ 0.38
HDAC6-231ENST00000488905 KCNE1BA0A087WTH5 132 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 MYBL2P10244 700 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 MAGEA3P43357 314 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 MPP1Q00013 466 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 PMP22Q01453 160 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 SRSF11Q05519 484 aaKnown RBP17.4■□□□□ 0.38
HDAC6-231ENST00000488905 ART3Q13508 389 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 PTK6Q13882 451 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 BTBD16Q32M84 506 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 SP5Q6BEB4 398 aaPredicted RBP17.4■□□□□ 0.38
HDAC6-231ENST00000488905 TMEM214Q6NUQ4 689 aaKnown RBP17.4■□□□□ 0.38
HDAC6-231ENST00000488905 TMEM207Q6UWW9 146 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 SHISA5Q8N114 240 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 AGGF1Q8N302 714 aaeCLIP17.4■□□□□ 0.38
HDAC6-231ENST00000488905 OR51Q1Q8NH59 317 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 ZCCHC10Q8TBK6 192 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 CALML6Q8TD86 181 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 MCOLN3Q8TDD5 553 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 CCDC120Q96HB5 630 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 CYTH2Q99418 400 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 AARSD1Q9BTE6 412 aaKnown RBP17.4■□□□□ 0.38
HDAC6-231ENST00000488905 C20orf96Q9NUD7 363 aaPredicted RBP17.4■□□□□ 0.38
HDAC6-231ENST00000488905 STMN3Q9NZ72 180 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 SEC14L3Q9UDX4 400 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 SH2B3Q9UQQ2 575 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 KLF2Q9Y5W3 355 aaPredicted RBP17.4■□□□□ 0.38
HDAC6-231ENST00000488905 PDZD2O15018 2839 aa17.4■□□□□ 0.38
HDAC6-231ENST00000488905 BCL6P41182 706 aa17.39■□□□□ 0.37
HDAC6-231ENST00000488905 CA7P43166 264 aa17.39■□□□□ 0.37
HDAC6-231ENST00000488905 LRRC8EQ6NSJ5 796 aa17.39■□□□□ 0.37
HDAC6-231ENST00000488905 CAMKVQ8NCB2 501 aa17.39■□□□□ 0.37
HDAC6-231ENST00000488905 THAP11Q96EK4 314 aa17.39■□□□□ 0.37
HDAC6-231ENST00000488905 MACROD1Q9BQ69 325 aa17.39■□□□□ 0.37
HDAC6-231ENST00000488905 FAM167BQ9BTA0 163 aa17.39■□□□□ 0.37
HDAC6-231ENST00000488905 PCBD2Q9H0N5 130 aa17.39■□□□□ 0.37
HDAC6-231ENST00000488905 ANKHQ9HCJ1 492 aa17.39■□□□□ 0.37
HDAC6-231ENST00000488905 TRMT6Q9UJA5 497 aaKnown RBP17.39■□□□□ 0.37
HDAC6-231ENST00000488905 FBXO5Q9UKT4 447 aa17.39■□□□□ 0.37
HDAC6-231ENST00000488905 MAD1L1Q9Y6D9 718 aa17.39■□□□□ 0.37
HDAC6-231ENST00000488905 A8MUI8 341 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 SGK494L7N484 410 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 HAUS5O94927 633 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 COILP38432 576 aaPredicted RBP17.38■□□□□ 0.37
HDAC6-231ENST00000488905 AGTR2P50052 363 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 CSNK1G2P78368 415 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 RBPJQ06330 500 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 SP140Q13342 867 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.38■□□□□ 0.37
HDAC6-231ENST00000488905 ZNF766Q5HY98 468 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 FCRLBQ6BAA4 426 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 H3F3CQ6NXT2 135 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 MTFR2Q6P444 385 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 MBOAT1Q6ZNC8 495 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 ANKRD37Q7Z713 158 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 PCGF5Q86SE9 256 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms