RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 LGALS13Q9UHV8 139 aa17.79■□□□□ 0.44
PTCD3-217ENST00000488801 DYRK1BQ9Y463 629 aa17.79■□□□□ 0.44
PTCD3-217ENST00000488801 ATRXP46100 2492 aa17.78■□□□□ 0.44
PTCD3-217ENST00000488801 FEZF1A0PJY2 475 aa17.78■□□□□ 0.44
PTCD3-217ENST00000488801 S100BP04271 92 aaPredicted RBP17.78■□□□□ 0.44
PTCD3-217ENST00000488801 KLK3P07288 261 aaPredicted RBP17.78■□□□□ 0.44
PTCD3-217ENST00000488801 SLCO1A2P46721 670 aa17.78■□□□□ 0.44
PTCD3-217ENST00000488801 SCTRP47872 440 aa17.78■□□□□ 0.44
PTCD3-217ENST00000488801 SNRPNP63162 240 aaKnown RBP17.78■□□□□ 0.44
PTCD3-217ENST00000488801 MEF2AQ02078 507 aaPredicted RBP17.78■□□□□ 0.44
PTCD3-217ENST00000488801 PCBP2Q15366 365 aaKnown RBP eCLIP17.78■□□□□ 0.44
PTCD3-217ENST00000488801 PDK4Q16654 411 aa17.78■□□□□ 0.44
PTCD3-217ENST00000488801 GARNL3Q5VVW2 1013 aa17.78■□□□□ 0.44
PTCD3-217ENST00000488801 METTL2BQ6P1Q9 378 aaKnown RBP17.78■□□□□ 0.44
PTCD3-217ENST00000488801 CCDC81Q6ZN84 652 aa17.78■□□□□ 0.44
PTCD3-217ENST00000488801 COX15Q7KZN9 410 aa17.78■□□□□ 0.44
PTCD3-217ENST00000488801 DTWD1Q8N5C7 304 aa17.78■□□□□ 0.44
PTCD3-217ENST00000488801 ZNF740Q8NDX6 193 aa17.78■□□□□ 0.44
PTCD3-217ENST00000488801 MR1Q95460 341 aa17.78■□□□□ 0.44
PTCD3-217ENST00000488801 KIAA1143Q96AT1 154 aaPredicted RBP17.78■□□□□ 0.44
PTCD3-217ENST00000488801 TMEM109Q9BVC6 243 aa17.78■□□□□ 0.44
PTCD3-217ENST00000488801 GPR87Q9BY21 358 aa17.78■□□□□ 0.44
PTCD3-217ENST00000488801 MRPL46Q9H2W6 279 aaKnown RBP17.78■□□□□ 0.44
PTCD3-217ENST00000488801 GEMIN8Q9NWZ8 242 aaKnown RBP17.78■□□□□ 0.44
PTCD3-217ENST00000488801 A0A1W2PPM1 405 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 HYKKA2RU49 373 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 TXNDC9O14530 226 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 RECKO95980 971 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 GSTA1P08263 222 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 TCN2P20062 427 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 CD22P20273 847 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 AHRP35869 848 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 CASP2P42575 452 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 NCF4Q15080 339 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 MUM1Q2TAK8 710 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 FAM214AQ32MH5 1076 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 MRPL14Q6P1L8 145 aaKnown RBP17.77■□□□□ 0.44
PTCD3-217ENST00000488801 C19orf48Q6RUI8 117 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 TTLL10Q6ZVT0 673 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 ANKRD53Q8N9V6 530 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 STARD8Q92502 1023 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 RERGQ96A58 199 aaPredicted RBP17.77■□□□□ 0.44
PTCD3-217ENST00000488801 MVB12AQ96EY5 273 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 CAPS2Q9BXY5 557 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 NLNQ9BYT8 704 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 PITHD1Q9GZP4 211 aaPredicted RBP17.77■□□□□ 0.44
PTCD3-217ENST00000488801 RRAGDQ9NQL2 400 aaPredicted RBP17.77■□□□□ 0.44
PTCD3-217ENST00000488801 TXLNGQ9NUQ3 528 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 IRAK4Q9NWZ3 460 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 TMEM216Q9P0N5 145 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 KCND3Q9UK17 655 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 TMCO1Q9UM00 188 aa17.77■□□□□ 0.44
PTCD3-217ENST00000488801 MRPS18BQ9Y676 258 aaKnown RBP17.77■□□□□ 0.44
PTCD3-217ENST00000488801 FOXO6A8MYZ6 492 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 STX16-NPEPL1H3BU86 382 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 K7EPI3 171 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 STX16O14662 325 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 CNOT3O75175 753 aaKnown RBP17.76■□□□□ 0.43
PTCD3-217ENST00000488801 WFS1O76024 890 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 C1GALT1C1LP0DN25 315 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 PYGBP11216 843 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 VARSP26640 1264 aaKnown RBP17.76■□□□□ 0.43
PTCD3-217ENST00000488801 GRK3P35626 688 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 DCDP81605 110 aaKnown RBP17.76■□□□□ 0.43
PTCD3-217ENST00000488801 NFKB2Q00653 900 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 FAM53BQ14153 422 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 TBCCQ15814 346 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 PFKFB4Q16877 469 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 NKAIN1Q4KMZ8 207 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 TMEM214Q6NUQ4 689 aaKnown RBP17.76■□□□□ 0.43
PTCD3-217ENST00000488801 ASPGQ86U10 573 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 FKBP10Q96AY3 582 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 AIF1LQ9BQI0 150 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 C1QTNF3Q9BXJ4 246 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 ROPN1BQ9BZX4 212 aaPredicted RBP17.76■□□□□ 0.43
PTCD3-217ENST00000488801 SLC7A5P2Q9GIP4 190 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 SLC26A1Q9H2B4 701 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 NT5DC2Q9H857 520 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 ROPN1Q9HAT0 212 aaPredicted RBP17.76■□□□□ 0.43
PTCD3-217ENST00000488801 ZFP69BQ9UJL9 534 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 EMCNQ9ULC0 261 aa17.76■□□□□ 0.43
PTCD3-217ENST00000488801 TLN1Q9Y490 2541 aaKnown RBP17.75■□□□□ 0.43
PTCD3-217ENST00000488801 LRRC14BA6NHZ5 514 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 ZNF891A8MT65 544 aaPredicted RBP17.75■□□□□ 0.43
PTCD3-217ENST00000488801 GOLGA8RI6L899 631 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 E2F3O00716 465 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 FOXS1O43638 330 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 CCNT2O60583 730 aaKnown RBP17.75■□□□□ 0.43
PTCD3-217ENST00000488801 KLF7O75840 302 aaPredicted RBP17.75■□□□□ 0.43
PTCD3-217ENST00000488801 EIF2S1P05198 315 aaKnown RBP17.75■□□□□ 0.43
PTCD3-217ENST00000488801 RPS17P08708 135 aaKnown RBP17.75■□□□□ 0.43
PTCD3-217ENST00000488801 GFAPP14136 432 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 AGXTP21549 392 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 PTPN4P29074 926 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 CXADRP78310 365 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 SLC18A2Q05940 514 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 HYAL2Q12891 473 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 C1orf189Q5VU69 101 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 PRMT9Q6P2P2 845 aa17.75■□□□□ 0.43
PTCD3-217ENST00000488801 ENDOVQ8N8Q3 282 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms