RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 SCN3BQ9NY72 215 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 NDRG4Q9ULP0 352 aaKnown RBP13.72□□□□□ -0.21
ABCB1-207ENST00000488737 ERVK-11Q9UQG0 969 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 hCG_2014768A0A024R1R8 64 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 GABRR3A8MPY1 467 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 TTC34A8MYJ7 566 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 PSMD11O00231 422 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 NPC1O15118 1278 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 MOSPD3O75425 235 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 ANXA4P09525 319 aaPredicted RBP13.72□□□□□ -0.21
ABCB1-207ENST00000488737 TIA1P31483 386 aaKnown RBP eCLIP13.72□□□□□ -0.21
ABCB1-207ENST00000488737 PCGF2P35227 344 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 CLK3P49761 638 aaKnown RBP13.72□□□□□ -0.21
ABCB1-207ENST00000488737 CCR3P51677 355 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 GP2P55259 537 aaKnown RBP13.72□□□□□ -0.21
ABCB1-207ENST00000488737 TEAD4Q15561 434 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 FAHD1Q6P587 224 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 GALNT18Q6P9A2 607 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 XKR5Q6UX68 686 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 LINC00299Q6ZSB3 139 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 B3GNT8Q7Z7M8 397 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 TSPYL5Q86VY4 417 aaPredicted RBP13.72□□□□□ -0.21
ABCB1-207ENST00000488737 SMYD1Q8NB12 490 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 OR7G3Q8NG95 312 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 CNIH3Q8TBE1 160 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 FAR1Q8WVX9 515 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 SH3KBP1Q96B97 665 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 TCEAL4Q96EI5 215 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 PLEKHA8Q96JA3 519 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 PKP4Q99569 1192 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 EPYCQ99645 322 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 PITX2Q99697 317 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 CCNB1IP1Q9NPC3 277 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 PDP1Q9P0J1 537 aaPredicted RBP13.72□□□□□ -0.21
ABCB1-207ENST00000488737 ZNF282Q9UDV7 671 aaPredicted RBP13.72□□□□□ -0.21
ABCB1-207ENST00000488737 VPS4AQ9UN37 437 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 SAMHD1Q9Y3Z3 626 aaKnown RBP13.72□□□□□ -0.21
ABCB1-207ENST00000488737 GMPPBQ9Y5P6 360 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 IRAK3Q9Y616 596 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 KCNE2Q9Y6J6 123 aa13.72□□□□□ -0.21
ABCB1-207ENST00000488737 PTGES3LE9PB15 166 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 E9PQ18 207 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 hCG_2039718K7EN88 272 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 RNASET2O00584 256 aaKnown RBP13.71□□□□□ -0.21
ABCB1-207ENST00000488737 YY2O15391 372 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 FKBP9O95302 570 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 SLC16A8O95907 504 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 C9P02748 559 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 CTSLP07711 333 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 SRPRAP08240 638 aaKnown RBP13.71□□□□□ -0.21
ABCB1-207ENST00000488737 LINC00271P0C7V0 271 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 PTPN2P17706 415 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 IDSP22304 550 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 HTR1BP28222 390 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 BDKRB1P46663 353 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 SLC35A2P78381 396 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 MVKQ03426 396 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 EMX1Q04741 257 aaPredicted RBP13.71□□□□□ -0.21
ABCB1-207ENST00000488737 TMEM115Q12893 351 aaPredicted RBP13.71□□□□□ -0.21
ABCB1-207ENST00000488737 ZNF648Q5T619 568 aaPredicted RBP13.71□□□□□ -0.21
ABCB1-207ENST00000488737 ERAP2Q6P179 960 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 MED27Q6P2C8 311 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 LIPIQ6XZB0 460 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 SLCO4C1Q6ZQN7 724 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 VTCN1Q7Z7D3 282 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 GALNT5Q7Z7M9 940 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 NLRP8Q86W28 1048 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 TTC29Q8NA56 475 aaPredicted RBP13.71□□□□□ -0.21
ABCB1-207ENST00000488737 HUS1BQ8NHY5 278 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 CDC26Q8NHZ8 85 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 ZFP90Q8TF47 636 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 WDR34Q96EX3 536 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 BARD1Q99728 777 aaKnown RBP13.71□□□□□ -0.21
ABCB1-207ENST00000488737 DGCR6LQ9BY27 220 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 BHLHE41Q9C0J9 482 aaPredicted RBP13.71□□□□□ -0.21
ABCB1-207ENST00000488737 LINC00597Q9H2U6 94 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 ADPRHL2Q9NX46 363 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 KIF17Q9P2E2 1029 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 ATP6V1HQ9UI12 483 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 FBXO10Q9UK96 956 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 FZD4Q9ULV1 537 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 BTBD3Q9Y2F9 522 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 PADI2Q9Y2J8 665 aa13.71□□□□□ -0.21
ABCB1-207ENST00000488737 KIAA1549LQ6ZVL6 1849 aa13.71□□□□□ -0.22
ABCB1-207ENST00000488737 MGAT4DA6NG13 374 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 FOXE1O00358 373 aaPredicted RBP13.7□□□□□ -0.22
ABCB1-207ENST00000488737 FOXD2O60548 495 aaPredicted RBP13.7□□□□□ -0.22
ABCB1-207ENST00000488737 BCAS1O75363 584 aaPredicted RBP13.7□□□□□ -0.22
ABCB1-207ENST00000488737 GABARAPO95166 117 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 ETHE1O95571 254 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 C1QCP02747 245 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 ELFN1P0C7U0 828 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 ACVR2AP27037 513 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 PREPP48147 710 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 BMXP51813 675 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 MAPK10P53779 464 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 PIGFQ07326 219 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 ELOAQ14241 798 aaKnown RBP13.7□□□□□ -0.22
ABCB1-207ENST00000488737 RGNQ15493 299 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 CCSMST1Q4G0I0 132 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms