RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 CSNK1G2P78368 415 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 MRPS25P82663 173 aaKnown RBP10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 MEF2AQ02078 507 aaPredicted RBP10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 CDC16Q13042 620 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 PDAP1Q13442 181 aaKnown RBP10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 NDUFA9Q16795 377 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 TEDDM1Q5T9Z0 273 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 HECTD2Q5U5R9 776 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 GARNL3Q5VVW2 1013 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 ISLR2Q6UXK2 745 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 NDUFAF7Q7L592 441 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 VN1R4Q7Z5H5 301 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 C17orf64Q86WR6 236 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 ZC3H7AQ8IWR0 971 aaKnown RBP10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 KBTBD2Q8IY47 623 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 PDIK1LQ8N165 341 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 ARHGEF39Q8N4T4 335 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 KCT2Q8NC54 265 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 GABPB2Q8TAK5 448 aaPredicted RBP10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 PPP4R1Q8TF05 950 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 SSC4DQ8WTU2 575 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 PYCR2Q96C36 320 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 MVB12AQ96EY5 273 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 HIST1H2AHQ96KK5 128 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 HIST1H2AJQ99878 128 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 WDR83Q9BRX9 315 aaKnown RBP10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 H2AFJQ9BTM1 129 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 PARVBQ9HBI1 364 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 MKKSQ9NPJ1 570 aaPredicted RBP10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 HCN3Q9P1Z3 774 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 DNAJC13O75165 2243 aa10.72□□□□□ -0.69
NIPAL3-207ENST00000488155 PABPN1LA6NDY0 278 aaKnown RBP10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 SGK494L7N484 410 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 GUCA1CO95843 209 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 PRR35P0CG20 571 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 BCL6P41182 706 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 IL2P60568 153 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 RPS15AP62244 130 aaKnown RBP10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 DR1Q01658 176 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 SRSF11Q05519 484 aaKnown RBP10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 FAM53BQ14153 422 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 ELOAQ14241 798 aaKnown RBP10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 ZNF169Q14929 603 aaPredicted RBP10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 MORF4L2Q15014 288 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 ZXDCQ2QGD7 858 aaPredicted RBP10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 MINDY4Q4G0A6 757 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 CRB2Q5IJ48 1285 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 B3GNTL1Q67FW5 361 aaPredicted RBP10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 LRRC8EQ6NSJ5 796 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 IGFL2Q6UWQ7 119 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 CAPN12Q6ZSI9 719 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 SLC26A11Q86WA9 606 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 CREG2Q8IUH2 290 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 CNTN4Q8IWV2 1026 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 OR1N1Q8NGS0 311 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 SLCO2A1Q92959 643 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 MAGEB10Q96LZ2 347 aaPredicted RBP10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 OLFM1Q99784 485 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 NAT9Q9BTE0 207 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 RBCK1Q9BYM8 510 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 C14orf105Q9NVL8 296 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 ARL15Q9NXU5 204 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 PLEKHB1Q9UF11 243 aaPredicted RBP10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 ERRFI1Q9UJM3 462 aaPredicted RBP10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 IKZF3Q9UKT9 509 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 PYCARDQ9ULZ3 195 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 VWA7Q9Y334 891 aa10.71□□□□□ -0.69
NIPAL3-207ENST00000488155 IGHV1-45A0A0A0MS14 117 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 ZNF860A6NHJ4 632 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 SLC16A5O15375 505 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 RDH16O75452 317 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 WFS1O76024 890 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 BMP10O95393 424 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 TSPAN12O95859 305 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 B3GALT4O96024 378 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 SERPIND1P05546 499 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 ITGAMP11215 1152 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 NPPBP16860 134 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 GRK3P35626 688 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 XCR1P46094 333 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 ST13P50502 369 aaKnown RBP10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 ARG2P78540 354 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 RELAQ04206 551 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 PDIA2Q13087 525 aaKnown RBP10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 SP140Q13342 867 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 MFAP5Q13361 173 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 ZNF460Q14592 562 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 FASTKD3Q14CZ7 662 aaKnown RBP10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 PCOLCEQ15113 449 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 C4orf17Q53FE4 359 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 CAPN13Q6MZZ7 669 aaPredicted RBP10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 HIBCHQ6NVY1 386 aaPredicted RBP10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 LCTLQ6UWM7 567 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 KIAA0408Q6ZU52 694 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 LANCL3Q6ZV70 420 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 ASPGQ86U10 573 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 CAMKVQ8NCB2 501 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 OR51Q1Q8NH59 317 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 GRHL3Q8TE85 626 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 SLC13A3Q8WWT9 602 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms