RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 PCBP2Q15366 365 aaKnown RBP eCLIP11.97□□□□□ -0.492e-37■■□□□ 14
HSPG2-211ENST00000486901 BAK1Q16611 211 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 COX20Q5RI15 118 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 LAX1Q8IWV1 398 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 GALNT12Q8IXK2 581 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 GPR65Q8IYL9 337 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 ZBTB2Q8N680 514 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 CLIP3Q96DZ5 547 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 TPT1P8Q9HAU6 139 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 DNAJC27Q9NZQ0 273 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 IL17CQ9P0M4 197 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 WBP11Q9Y2W2 641 aaKnown RBP11.97□□□□□ -0.49
HSPG2-211ENST00000486901 SLC28A1O00337 649 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 ACSL4O60488 711 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 CPNE3O75131 537 aaKnown RBP11.97□□□□□ -0.49
HSPG2-211ENST00000486901 CCNDBP1O95273 360 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 EPOP01588 193 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 SLC15A1P46059 708 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 NRIP1P48552 1158 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 DSC3Q14574 896 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 RFX4Q33E94 735 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 PPP2R2DQ66LE6 453 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 GLB1LQ6UWU2 654 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 TPGS1Q6ZTW0 290 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 UBE2R2Q712K3 238 aaPredicted RBP11.97□□□□□ -0.49
HSPG2-211ENST00000486901 OLIG3Q7RTU3 272 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 CYP2U1Q7Z449 544 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 PTOV1Q86YD1 416 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 GALNT13Q8IUC8 556 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 STK40Q8N2I9 435 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 B3GNT7Q8NFL0 401 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 PCNPQ8WW12 178 aaKnown RBP11.97□□□□□ -0.49
HSPG2-211ENST00000486901 C17orf50Q8WW18 174 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 OTUB1Q96FW1 271 aaPredicted RBP11.97□□□□□ -0.49
HSPG2-211ENST00000486901 KCNH6Q9H252 994 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 TM9SF3Q9HD45 589 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 IGLV3-10A0A075B6K4 115 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 A0A0U1RQF3 1178 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 GNG14A0A1W2PPG7 69 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 CLEC2LP0C7M8 214 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 EPORP19235 508 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 CXCR2P25025 360 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 PTGER1P34995 402 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 GZMMP51124 257 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 YBEYP58557 167 aaPredicted RBP11.97□□□□□ -0.49
HSPG2-211ENST00000486901 RPS26P62854 115 aaKnown RBP11.97□□□□□ -0.49
HSPG2-211ENST00000486901 ABHD18Q0P651 414 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 ABRQ12979 859 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 CHIT1Q13231 466 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 EXOC3L2Q2M3D2 409 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 WDR53Q7Z5U6 358 aaPredicted RBP11.97□□□□□ -0.49
HSPG2-211ENST00000486901 TSPYL5Q86VY4 417 aaPredicted RBP11.97□□□□□ -0.49
HSPG2-211ENST00000486901 ZZZ3Q8IYH5 903 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 AADATQ8N5Z0 425 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 IL17RDQ8NFM7 739 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 OR10G2Q8NGC3 310 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 TXNDC15Q96J42 360 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 MMP27Q9H306 513 aa11.97□□□□□ -0.49
HSPG2-211ENST00000486901 TRAV19A0A0A6YYK7 116 aa11.96□□□□□ -0.49
HSPG2-211ENST00000486901 C2orf78A6NCI8 922 aa11.96□□□□□ -0.49
HSPG2-211ENST00000486901 OR2AG2A6NM03 316 aa11.96□□□□□ -0.49
HSPG2-211ENST00000486901 FAM220BPB1ANY3 271 aa11.96□□□□□ -0.49
HSPG2-211ENST00000486901 ITGAMP11215 1152 aa11.96□□□□□ -0.49
HSPG2-211ENST00000486901 ACVR2AP27037 513 aa11.96□□□□□ -0.49
HSPG2-211ENST00000486901 PTPN6P29350 595 aa11.96□□□□□ -0.49
HSPG2-211ENST00000486901 TNFSF8P32971 234 aa11.96□□□□□ -0.49
HSPG2-211ENST00000486901 HOXC5Q00444 222 aa11.96□□□□□ -0.49
HSPG2-211ENST00000486901 MC1RQ01726 317 aa11.96□□□□□ -0.49
HSPG2-211ENST00000486901 NFE2L1Q14494 772 aa11.96□□□□□ -0.49
HSPG2-211ENST00000486901 PCBP1Q15365 356 aaKnown RBP eCLIP11.96□□□□□ -0.491e-6■■□□□ 13.3
HSPG2-211ENST00000486901 CCDC58Q4VC31 144 aa11.96□□□□□ -0.49
HSPG2-211ENST00000486901 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.96□□□□□ -0.49
HSPG2-211ENST00000486901 ATG9BQ674R7 924 aa11.96□□□□□ -0.49
HSPG2-211ENST00000486901 NOXRED1Q6NXP6 359 aa11.96□□□□□ -0.49
HSPG2-211ENST00000486901 REM2Q8IYK8 340 aaPredicted RBP11.96□□□□□ -0.49
HSPG2-211ENST00000486901 SLC34A3Q8N130 599 aa11.96□□□□□ -0.49
HSPG2-211ENST00000486901 PARK7Q99497 189 aaKnown RBP11.96□□□□□ -0.49
HSPG2-211ENST00000486901 PKP4Q99569 1192 aa11.96□□□□□ -0.49
HSPG2-211ENST00000486901 ZFYVE1Q9HBF4 777 aa11.96□□□□□ -0.49
HSPG2-211ENST00000486901 MOSPD1Q9UJG1 213 aa11.96□□□□□ -0.49
HSPG2-211ENST00000486901 CENPXA8MT69 81 aa11.96□□□□□ -0.5
HSPG2-211ENST00000486901 SUV39H1O43463 412 aa11.96□□□□□ -0.5
HSPG2-211ENST00000486901 TBL1XO60907 577 aa11.96□□□□□ -0.5
HSPG2-211ENST00000486901 ERN1O75460 977 aaKnown RBP11.96□□□□□ -0.5
HSPG2-211ENST00000486901 RGS6P49758 472 aa11.96□□□□□ -0.5
HSPG2-211ENST00000486901 MEF2AQ02078 507 aaPredicted RBP11.96□□□□□ -0.5
HSPG2-211ENST00000486901 GAB1Q13480 694 aa11.96□□□□□ -0.5
HSPG2-211ENST00000486901 UGT8Q16880 541 aa11.96□□□□□ -0.5
HSPG2-211ENST00000486901 INO80DQ53TQ3 878 aaPredicted RBP11.96□□□□□ -0.5
HSPG2-211ENST00000486901 KIAA1841Q6NSI8 718 aa11.96□□□□□ -0.5
HSPG2-211ENST00000486901 SZRD1Q7Z422 152 aa11.96□□□□□ -0.5
HSPG2-211ENST00000486901 LGI4Q8N135 537 aa11.96□□□□□ -0.5
HSPG2-211ENST00000486901 LILRA3Q8N6C8 439 aaPredicted RBP11.96□□□□□ -0.5
HSPG2-211ENST00000486901 LILRB4Q8NHJ6 448 aa11.96□□□□□ -0.5
HSPG2-211ENST00000486901 GFM1Q96RP9 751 aaKnown RBP11.96□□□□□ -0.5
HSPG2-211ENST00000486901 C1QTNF3Q9BXJ4 246 aa11.96□□□□□ -0.5
HSPG2-211ENST00000486901 CPNE5Q9HCH3 593 aa11.96□□□□□ -0.5
HSPG2-211ENST00000486901 TMEM39AQ9NV64 488 aa11.96□□□□□ -0.5
HSPG2-211ENST00000486901 TAS2R9Q9NYW1 312 aa11.96□□□□□ -0.5
HSPG2-211ENST00000486901 YARS2Q9Y2Z4 477 aaKnown RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms