RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 ZNF385CQ66K41 422 aaPredicted RBP9.54□□□□□ -0.88
CPSF4-213ENST00000484112 FCRL6Q6DN72 434 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 CAPN13Q6MZZ7 669 aaPredicted RBP9.54□□□□□ -0.88
CPSF4-213ENST00000484112 RHBDD2Q6NTF9 364 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 AGTRAPQ6RW13 159 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 LCTLQ6UWM7 567 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 SBSNQ6UWP8 590 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 IGFL3Q6UXB1 125 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 Q6ZS92 163 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 RNF44Q7L0R7 432 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 TRIM73Q86UV7 250 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 CEP97Q8IW35 865 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 TMEM151BQ8IW70 566 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 ST6GALNAC3Q8NDV1 305 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 FBXL8Q96CD0 374 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 THAP11Q96EK4 314 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 PLCD4Q9BRC7 762 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 SGPP1Q9BX95 441 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 UNKQ9C0B0 810 aaKnown RBP9.54□□□□□ -0.88
CPSF4-213ENST00000484112 FAM60AQ9NP50 221 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 ATP13A2Q9NQ11 1180 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 ARL15Q9NXU5 204 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 EURLQ9NYK6 297 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 DHCR7Q9UBM7 475 aaKnown RBP9.54□□□□□ -0.88
CPSF4-213ENST00000484112 CTNNAL1Q9UBT7 734 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 FETUBQ9UGM5 382 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 ZNF180Q9UJW8 692 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 ADAMTS6Q9UKP5 1117 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 NFU1Q9UMS0 254 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 MTO1Q9Y2Z2 717 aaKnown RBP9.54□□□□□ -0.88
CPSF4-213ENST00000484112 OARD1Q9Y530 152 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 PCDHGA10Q9Y5H3 936 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 CSAG2Q9Y5P2 127 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 IKBKGQ9Y6K9 419 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 HIVEP3Q5T1R4 2406 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 A0A087X1B8 175 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 FITM1A5D6W6 292 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 PRSS44E7EML9 344 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 ZSCAN9O15535 394 aaPredicted RBP9.53□□□□□ -0.88
CPSF4-213ENST00000484112 HCRTR1O43613 425 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 ZG16O60844 167 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 ALOX12BO75342 701 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 KRT38O76015 456 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 CTSBP07858 339 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 INHBAP08476 426 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 SAT1P21673 171 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 PER3P56645 1201 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 TBPL1P62380 186 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 FASTKQ14296 549 aaKnown RBP9.53□□□□□ -0.88
CPSF4-213ENST00000484112 GRM7Q14831 915 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 PHKG1Q16816 387 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 FAM214AQ32MH5 1076 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 LGSNQ5TDP6 509 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 THEMIS2Q5TEJ8 643 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 PRAMEF13Q5VWM6 474 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 ZNF425Q6IV72 752 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 TMEM207Q6UWW9 146 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 PPP1R32Q7Z5V6 425 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 TBC1D1Q86TI0 1168 aaPredicted RBP9.53□□□□□ -0.88
CPSF4-213ENST00000484112 TAX1BP1Q86VP1 789 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 MCATQ8IVS2 390 aaKnown RBP9.53□□□□□ -0.88
CPSF4-213ENST00000484112 KLHDC8AQ8IYD2 350 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 C2orf73Q8N5S3 287 aaPredicted RBP9.53□□□□□ -0.88
CPSF4-213ENST00000484112 ZNF655Q8N720 491 aaPredicted RBP9.53□□□□□ -0.88
CPSF4-213ENST00000484112 TTC29Q8NA56 475 aaPredicted RBP9.53□□□□□ -0.88
CPSF4-213ENST00000484112 OR2Y1Q8NGV0 311 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 OR56A3Q8NH54 315 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 DNAJB14Q8TBM8 379 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 GRHL3Q8TE85 626 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 SLC44A1Q8WWI5 657 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 PTERQ96BW5 349 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 CNDP1Q96KN2 507 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 GBP5Q96PP8 586 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 ZFYVE21Q9BQ24 234 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 WDR77Q9BQA1 342 aaPredicted RBP9.53□□□□□ -0.88
CPSF4-213ENST00000484112 SELENOSQ9BQE4 189 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 DPH7Q9BTV6 452 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 NDC1Q9BTX1 674 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 CAPS2Q9BXY5 557 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 PPCSQ9HAB8 311 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 NMRAL1Q9HBL8 299 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 TXLNGQ9NUQ3 528 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 TMEM184CQ9NVA4 438 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 CIDEBQ9UHD4 219 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 TAC3Q9UHF0 121 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 TSR3Q9UJK0 312 aaKnown RBP9.53□□□□□ -0.88
CPSF4-213ENST00000484112 ACOT9Q9Y305 439 aa9.53□□□□□ -0.88
CPSF4-213ENST00000484112 KCNE1BA0A087WTH5 132 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 CNOT3O75175 753 aaKnown RBP9.52□□□□□ -0.89
CPSF4-213ENST00000484112 ACSL3O95573 720 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 ONECUT2O95948 504 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 UMODP07911 640 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 RHOXF2BP0C7M4 288 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 CCDC166P0CW27 439 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 PIM1P11309 404 aaPredicted RBP9.52□□□□□ -0.89
CPSF4-213ENST00000484112 CD1DP15813 335 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 ALAS2P22557 587 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 GRK3P35626 688 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 GGT5P36269 586 aa9.52□□□□□ -0.89
CPSF4-213ENST00000484112 GCGRP47871 477 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms