RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 PCNX3Q9H6A9 2034 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 HEG1Q9ULI3 1381 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 IGHV3OR16-10A0A075B7F0 116 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 A0A1W2PPW3 197 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 F8VVB4 439 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 F8VWA3 439 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 LUC7L3O95232 432 aaKnown RBP4.3□□□□□ -1.72
CALD1-219ENST00000480638 STAG3L1P0CL83 205 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 FDPSP14324 419 aaKnown RBP4.3□□□□□ -1.72
CALD1-219ENST00000480638 RGS7P49802 495 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 MFAP3P55082 362 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 OR1D5P58170 312 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 ELAVL2Q12926 359 aaKnown RBP4.3□□□□□ -1.72
CALD1-219ENST00000480638 C11orf57Q6ZUT1 292 aaPredicted RBP4.3□□□□□ -1.72
CALD1-219ENST00000480638 CPEB2Q7Z5Q1 589 aaKnown RBP4.3□□□□□ -1.72
CALD1-219ENST00000480638 ADCK2Q7Z695 626 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 NRARPQ7Z6K4 114 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 AMIGO1Q86WK6 493 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 CCDC60Q8IWA6 550 aaPredicted RBP4.3□□□□□ -1.72
CALD1-219ENST00000480638 GBP7Q8N8V2 638 aaPredicted RBP4.3□□□□□ -1.72
CALD1-219ENST00000480638 OR4C15Q8NGM1 316 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 NSMAFQ92636 917 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 CNRIP1Q96F85 164 aaPredicted RBP4.3□□□□□ -1.72
CALD1-219ENST00000480638 RADILQ96JH8 1075 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 BAG1Q99933 345 aaPredicted RBP4.3□□□□□ -1.72
CALD1-219ENST00000480638 GPATCH1Q9BRR8 931 aaKnown RBP4.3□□□□□ -1.72
CALD1-219ENST00000480638 SNX25Q9H3E2 840 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 RIMS4Q9H426 269 aaPredicted RBP4.3□□□□□ -1.72
CALD1-219ENST00000480638 MTHFD2LQ9H903 347 aaPredicted RBP4.3□□□□□ -1.72
CALD1-219ENST00000480638 B3GAT2Q9NPZ5 323 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 TBC1D13Q9NVG8 400 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 IL36AQ9UHA7 158 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 KLK13Q9UKR3 277 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 MOB4Q9Y3A3 225 aa4.3□□□□□ -1.72
CALD1-219ENST00000480638 TDRD15B5MCY1 1934 aaKnown RBP4.29□□□□□ -1.72
CALD1-219ENST00000480638 LOC105371242A0A075B767 164 aa4.29□□□□□ -1.72
CALD1-219ENST00000480638 ANXA2P2A6NMY6 339 aa4.29□□□□□ -1.72
CALD1-219ENST00000480638 AADACP22760 399 aa4.29□□□□□ -1.72
CALD1-219ENST00000480638 RBMS1P29558 406 aaKnown RBP4.29□□□□□ -1.72
CALD1-219ENST00000480638 NPY4RP50391 375 aa4.29□□□□□ -1.72
CALD1-219ENST00000480638 LY6DQ14210 128 aa4.29□□□□□ -1.72
CALD1-219ENST00000480638 LRRC73Q5JTD7 316 aa4.29□□□□□ -1.72
CALD1-219ENST00000480638 CHMP1BQ7LBR1 199 aa4.29□□□□□ -1.72
CALD1-219ENST00000480638 ZER1Q7Z7L7 766 aa4.29□□□□□ -1.72
CALD1-219ENST00000480638 CCDC63Q8NA47 563 aa4.29□□□□□ -1.72
CALD1-219ENST00000480638 Q8NFD4 153 aa4.29□□□□□ -1.72
CALD1-219ENST00000480638 AGAP4Q96P64 663 aa4.29□□□□□ -1.72
CALD1-219ENST00000480638 DNAI2Q9GZS0 605 aa4.29□□□□□ -1.72
CALD1-219ENST00000480638 RNF121Q9H920 327 aa4.29□□□□□ -1.72
CALD1-219ENST00000480638 PHPT1Q9NRX4 125 aaPredicted RBP4.29□□□□□ -1.72
CALD1-219ENST00000480638 HACD3Q9P035 362 aa4.29□□□□□ -1.72
CALD1-219ENST00000480638 SNX7Q9UNH6 387 aa4.29□□□□□ -1.72
CALD1-219ENST00000480638 COL2A1P02458 1487 aaPredicted RBP4.29□□□□□ -1.72
CALD1-219ENST00000480638 A0A087WV48 116 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 SLC1A7O00341 560 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 SURF4O15260 269 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 TIMM44O43615 452 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 CYTIPO60759 359 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 APOA4P06727 396 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 PDHA2P29803 388 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 DUTP33316 252 aaKnown RBP4.28□□□□□ -1.72
CALD1-219ENST00000480638 TAZQ16635 292 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 UGCGQ16739 394 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 ZNF343Q6P1L6 599 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 TTC27Q6P3X3 843 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 SUSD1Q6UWL2 747 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 GPRIN3Q6ZVF9 776 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 DNAJB7Q7Z6W7 309 aaPredicted RBP4.28□□□□□ -1.72
CALD1-219ENST00000480638 SLFN11Q7Z7L1 901 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 METTL4Q8N3J2 472 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 C9orf43Q8TAL5 461 aaPredicted RBP4.28□□□□□ -1.72
CALD1-219ENST00000480638 MIPOL1Q8TD10 442 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 ATXN7L3BQ96GX2 97 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 GDAP1L1Q96MZ0 367 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 CHCHD3Q9NX63 227 aaKnown RBP4.28□□□□□ -1.72
CALD1-219ENST00000480638 MUTYHQ9UIF7 546 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 LNPEPQ9UIQ6 1025 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 ANAPC5Q9UJX4 755 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 PILRBQ9UKJ0 227 aa4.28□□□□□ -1.72
CALD1-219ENST00000480638 PA2G4Q9UQ80 394 aaKnown RBP4.28□□□□□ -1.72
CALD1-219ENST00000480638 NPIPB9F8W1W9 429 aa4.27□□□□□ -1.73
CALD1-219ENST00000480638 G3V2L1 256 aa4.27□□□□□ -1.73
CALD1-219ENST00000480638 PRAF2O60831 178 aa4.27□□□□□ -1.73
CALD1-219ENST00000480638 YES1P07947 543 aa4.27□□□□□ -1.73
CALD1-219ENST00000480638 SPP1P10451 314 aa4.27□□□□□ -1.73
CALD1-219ENST00000480638 MYOGP15173 224 aa4.27□□□□□ -1.73
CALD1-219ENST00000480638 GATA1P15976 413 aaPredicted RBP4.27□□□□□ -1.73
CALD1-219ENST00000480638 ZNF10P21506 573 aaPredicted RBP4.27□□□□□ -1.73
CALD1-219ENST00000480638 GMPSP49915 693 aaPredicted RBP4.27□□□□□ -1.73
CALD1-219ENST00000480638 DSCR10P59022 87 aa4.27□□□□□ -1.73
CALD1-219ENST00000480638 SULT2A1Q06520 285 aa4.27□□□□□ -1.73
CALD1-219ENST00000480638 RAPSNQ13702 412 aa4.27□□□□□ -1.73
CALD1-219ENST00000480638 FAM189A2Q15884 450 aa4.27□□□□□ -1.73
CALD1-219ENST00000480638 FAM166AQ6J272 317 aa4.27□□□□□ -1.73
CALD1-219ENST00000480638 MOXD1Q6UVY6 613 aa4.27□□□□□ -1.73
CALD1-219ENST00000480638 PRSS55Q6UWB4 352 aaPredicted RBP4.27□□□□□ -1.73
CALD1-219ENST00000480638 GDPGP1Q6ZNW5 385 aa4.27□□□□□ -1.73
CALD1-219ENST00000480638 APCDD1Q8J025 514 aa4.27□□□□□ -1.73
CALD1-219ENST00000480638 TCEANCQ8N8B7 351 aa4.27□□□□□ -1.73
CALD1-219ENST00000480638 ATP8B4Q8TF62 1192 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms